Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.73■□□□□ 0.11
SUMO3P55854 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.73■□□□□ 0.11
SUMO3P55854 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SUMO3P55854 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SUMO3P55854 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SUMO3P55854 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.73■□□□□ 0.11
SUMO3P55854 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SUMO3P55854 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SUMO3P55854 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.73■□□□□ 0.11
SUMO3P55854 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
SUMO3P55854 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SUMO3P55854 AC004817.3-201ENST00000602957 2129 ntBASIC15.73■□□□□ 0.11
SUMO3P55854 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.73■□□□□ 0.11
SUMO3P55854 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SUMO3P55854 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SUMO3P55854 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SUMO3P55854 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SUMO3P55854 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SUMO3P55854 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.72■□□□□ 0.11
SUMO3P55854 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.72■□□□□ 0.11
SUMO3P55854 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.72■□□□□ 0.11
SUMO3P55854 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.72■□□□□ 0.11
SUMO3P55854 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.72■□□□□ 0.11
SUMO3P55854 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.72■□□□□ 0.11
SUMO3P55854 AC139887.3-201ENST00000568585 713 ntBASIC15.72■□□□□ 0.11
SUMO3P55854 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 RN7SL510P-201ENST00000581311 263 ntBASIC15.72■□□□□ 0.11
SUMO3P55854 MTDHP4-201ENST00000600287 670 ntBASIC15.72■□□□□ 0.11
SUMO3P55854 AL353135.1-201ENST00000606729 504 ntBASIC15.72■□□□□ 0.11
SUMO3P55854 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SUMO3P55854 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SUMO3P55854 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SUMO3P55854 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.72■□□□□ 0.11
SUMO3P55854 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SUMO3P55854 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SUMO3P55854 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 LINC02012-201ENST00000608206 1725 ntBASIC15.71■□□□□ 0.11
SUMO3P55854 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SUMO3P55854 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.71■□□□□ 0.11
SUMO3P55854 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.71■□□□□ 0.11
SUMO3P55854 LAGE3P1-201ENST00000425356 484 ntBASIC15.71■□□□□ 0.11
SUMO3P55854 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.71■□□□□ 0.11
SUMO3P55854 EMBP1-201ENST00000458200 901 ntBASIC15.71■□□□□ 0.11
SUMO3P55854 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.71■□□□□ 0.11
SUMO3P55854 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 AL139424.1-201ENST00000607572 797 ntBASIC15.71■□□□□ 0.11
SUMO3P55854 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SUMO3P55854 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SUMO3P55854 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.71■□□□□ 0.1
SUMO3P55854 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
SUMO3P55854 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.71■□□□□ 0.1
SUMO3P55854 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SUMO3P55854 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
SUMO3P55854 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SUMO3P55854 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
SUMO3P55854 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SUMO3P55854 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.7■□□□□ 0.1
SUMO3P55854 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SUMO3P55854 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms