Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 UXT-AS1-201ENST00000590504 1525 ntBASIC19.06■□□□□ 0.64
ATN1P54259 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATN1P54259 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.06■□□□□ 0.64
ATN1P54259 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.06■□□□□ 0.64
ATN1P54259 SPCS2P4-201ENST00000436160 681 ntBASIC19.06■□□□□ 0.64
ATN1P54259 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC19.06■□□□□ 0.64
ATN1P54259 AC087163.2-201ENST00000457299 853 ntBASIC19.06■□□□□ 0.64
ATN1P54259 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.06■□□□□ 0.64
ATN1P54259 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.06■□□□□ 0.64
ATN1P54259 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.06■□□□□ 0.64
ATN1P54259 RARRES2P8-201ENST00000566335 367 ntBASIC19.06■□□□□ 0.64
ATN1P54259 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ATN1P54259 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATN1P54259 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.06■□□□□ 0.64
ATN1P54259 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.06■□□□□ 0.64
ATN1P54259 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.06■□□□□ 0.64
ATN1P54259 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATN1P54259 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 AC129492.6-201ENST00000611383 1305 ntBASIC19.05■□□□□ 0.64
ATN1P54259 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 OR8S1-201ENST00000310194 1080 ntBASIC19.05■□□□□ 0.64
ATN1P54259 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.05■□□□□ 0.64
ATN1P54259 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.05■□□□□ 0.64
ATN1P54259 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.05■□□□□ 0.64
ATN1P54259 IGHV3-62-201ENST00000520057 340 ntBASIC19.05■□□□□ 0.64
ATN1P54259 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.05■□□□□ 0.64
ATN1P54259 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.05■□□□□ 0.64
ATN1P54259 AC026150.2-201ENST00000564693 1156 ntBASIC19.05■□□□□ 0.64
ATN1P54259 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.05■□□□□ 0.64
ATN1P54259 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.05■□□□□ 0.64
ATN1P54259 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.05■□□□□ 0.64
ATN1P54259 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ATN1P54259 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATN1P54259 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ATN1P54259 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.04■□□□□ 0.64
ATN1P54259 AL031598.1-201ENST00000561511 1773 ntBASIC19.04■□□□□ 0.64
ATN1P54259 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.04■□□□□ 0.64
ATN1P54259 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.04■□□□□ 0.64
ATN1P54259 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.04■□□□□ 0.64
ATN1P54259 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.04■□□□□ 0.64
ATN1P54259 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.04■□□□□ 0.64
ATN1P54259 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.04■□□□□ 0.64
ATN1P54259 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.04■□□□□ 0.64
ATN1P54259 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.04■□□□□ 0.64
ATN1P54259 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ATN1P54259 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.04■□□□□ 0.64
ATN1P54259 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
ATN1P54259 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATN1P54259 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ATN1P54259 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.03■□□□□ 0.64
ATN1P54259 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATN1P54259 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.03■□□□□ 0.64
ATN1P54259 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.03■□□□□ 0.64
ATN1P54259 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATN1P54259 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.03■□□□□ 0.64
ATN1P54259 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ATN1P54259 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms