Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDX1P52945 AC006504.4-201ENST00000592118 1568 ntBASIC16.89■□□□□ 0.3
PDX1P52945 AL049757.1-201ENST00000616842 1596 ntBASIC16.89■□□□□ 0.3
PDX1P52945 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDX1P52945 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PDX1P52945 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PDX1P52945 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.89■□□□□ 0.29
PDX1P52945 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDX1P52945 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDX1P52945 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.89■□□□□ 0.29
PDX1P52945 AL020989.1-201ENST00000422979 469 ntBASIC16.89■□□□□ 0.29
PDX1P52945 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.89■□□□□ 0.29
PDX1P52945 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.89■□□□□ 0.29
PDX1P52945 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.89■□□□□ 0.29
PDX1P52945 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.89■□□□□ 0.29
PDX1P52945 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.89■□□□□ 0.29
PDX1P52945 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.89■□□□□ 0.29
PDX1P52945 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.89■□□□□ 0.29
PDX1P52945 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.89■□□□□ 0.29
PDX1P52945 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.89■□□□□ 0.29
PDX1P52945 MTDHP5-201ENST00000598980 586 ntBASIC16.89■□□□□ 0.29
PDX1P52945 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.89■□□□□ 0.29
PDX1P52945 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.89■□□□□ 0.29
PDX1P52945 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.89■□□□□ 0.29
PDX1P52945 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDX1P52945 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 HTR7P1-202ENST00000624664 4411 ntBASIC16.89■□□□□ 0.29
PDX1P52945 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDX1P52945 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.88■□□□□ 0.29
PDX1P52945 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PDX1P52945 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
PDX1P52945 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.88■□□□□ 0.29
PDX1P52945 MCCD1P2-201ENST00000423228 335 ntBASIC16.88■□□□□ 0.29
PDX1P52945 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.88■□□□□ 0.29
PDX1P52945 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.88■□□□□ 0.29
PDX1P52945 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.88■□□□□ 0.29
PDX1P52945 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.88■□□□□ 0.29
PDX1P52945 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.88■□□□□ 0.29
PDX1P52945 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.88■□□□□ 0.29
PDX1P52945 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PDX1P52945 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.88■□□□□ 0.29
PDX1P52945 AC079781.4-201ENST00000641908 219 ntBASIC16.88■□□□□ 0.29
PDX1P52945 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PDX1P52945 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.88■□□□□ 0.29
PDX1P52945 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDX1P52945 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PDX1P52945 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDX1P52945 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDX1P52945 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDX1P52945 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.87■□□□□ 0.29
PDX1P52945 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDX1P52945 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.87■□□□□ 0.29
PDX1P52945 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PDX1P52945 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.87■□□□□ 0.29
PDX1P52945 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.87■□□□□ 0.29
PDX1P52945 ALG1L5P-201ENST00000482043 771 ntBASIC16.87■□□□□ 0.29
PDX1P52945 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms