Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA2P51531 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA2P51531 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCA2P51531 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA2P51531 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC30.44■■■□□ 2.46
SMARCA2P51531 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC30.44■■■□□ 2.46
SMARCA2P51531 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA2P51531 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC30.44■■■□□ 2.46
SMARCA2P51531 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SMARCA2P51531 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA2P51531 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC30.44■■■□□ 2.46
SMARCA2P51531 AC016027.1-202ENST00000607927 1699 ntBASIC30.43■■■□□ 2.46
SMARCA2P51531 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA2P51531 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCA2P51531 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC30.43■■■□□ 2.46
SMARCA2P51531 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCA2P51531 TP53TG3HP-202ENST00000569755 579 ntBASIC30.43■■■□□ 2.46
SMARCA2P51531 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCA2P51531 GRAMD4P3-201ENST00000621665 1669 ntBASIC30.43■■■□□ 2.46
SMARCA2P51531 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC30.43■■■□□ 2.46
SMARCA2P51531 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCA2P51531 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC30.43■■■□□ 2.46
SMARCA2P51531 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC30.42■■■□□ 2.46
SMARCA2P51531 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA2P51531 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC30.42■■■□□ 2.46
SMARCA2P51531 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA2P51531 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC30.42■■■□□ 2.46
SMARCA2P51531 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC30.42■■■□□ 2.46
SMARCA2P51531 HLA-V-204ENST00000476601 1289 ntBASIC30.42■■■□□ 2.46
SMARCA2P51531 CDK4-206ENST00000549606 558 ntTSL 2 BASIC30.42■■■□□ 2.46
SMARCA2P51531 AL844908.2-201ENST00000609461 460 ntBASIC30.42■■■□□ 2.46
SMARCA2P51531 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA2P51531 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCA2P51531 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC30.42■■■□□ 2.46
SMARCA2P51531 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC30.42■■■□□ 2.46
SMARCA2P51531 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
SMARCA2P51531 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 HNRNPA3P1-201ENST00000401429 1139 ntBASIC30.41■■■□□ 2.46
SMARCA2P51531 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC30.41■■■□□ 2.46
SMARCA2P51531 HNRNPA3P5-201ENST00000455201 833 ntBASIC30.41■■■□□ 2.46
SMARCA2P51531 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC30.41■■■□□ 2.46
SMARCA2P51531 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
SMARCA2P51531 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC30.41■■■□□ 2.46
SMARCA2P51531 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 RARRES2P9-201ENST00000565168 469 ntBASIC30.41■■■□□ 2.46
SMARCA2P51531 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCA2P51531 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC30.4■■■□□ 2.46
SMARCA2P51531 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA2P51531 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SMARCA2P51531 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA2P51531 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA2P51531 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA2P51531 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA2P51531 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA2P51531 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC30.4■■■□□ 2.46
SMARCA2P51531 API5-211ENST00000534695 560 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA2P51531 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC30.4■■■□□ 2.46
SMARCA2P51531 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC30.4■■■□□ 2.46
SMARCA2P51531 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA2P51531 AC008738.7-201ENST00000609744 511 ntBASIC30.4■■■□□ 2.46
SMARCA2P51531 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC30.4■■■□□ 2.46
SMARCA2P51531 GPER1-207ENST00000619052 571 ntTSL 2 BASIC30.4■■■□□ 2.46
SMARCA2P51531 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA2P51531 NARF-206ENST00000457415 1668 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCA2P51531 SLC22A20-204ENST00000530038 1673 ntBASIC30.4■■■□□ 2.46
SMARCA2P51531 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCA2P51531 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
SMARCA2P51531 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC30.39■■■□□ 2.46
SMARCA2P51531 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC30.39■■■□□ 2.46
SMARCA2P51531 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC30.39■■■□□ 2.46
SMARCA2P51531 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA2P51531 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA2P51531 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA2P51531 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA2P51531 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.46
SMARCA2P51531 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA2P51531 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC30.39■■■□□ 2.46
SMARCA2P51531 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA2P51531 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCA2P51531 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC30.39■■■□□ 2.46
SMARCA2P51531 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC30.39■■■□□ 2.46
SMARCA2P51531 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
SMARCA2P51531 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
SMARCA2P51531 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
SMARCA2P51531 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC30.38■■■□□ 2.45
SMARCA2P51531 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA2P51531 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC30.38■■■□□ 2.45
SMARCA2P51531 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA2P51531 GIMAP3P-201ENST00000495150 836 ntBASIC30.38■■■□□ 2.45
SMARCA2P51531 AC105233.2-201ENST00000523697 349 ntBASIC30.38■■■□□ 2.45
SMARCA2P51531 AF228730.5-201ENST00000530288 346 ntBASIC30.38■■■□□ 2.45
SMARCA2P51531 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA2P51531 AC091167.2-201ENST00000579581 588 ntBASIC30.38■■■□□ 2.45
SMARCA2P51531 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMARCA2P51531 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms