Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.4■□□□□ 0.7
CENPFP49454 AL162274.1-201ENST00000617191 1098 ntBASIC19.4■□□□□ 0.7
CENPFP49454 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPFP49454 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
CENPFP49454 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.4■□□□□ 0.7
CENPFP49454 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 AL512384.1-201ENST00000406683 331 ntBASIC19.4■□□□□ 0.7
CENPFP49454 AL513480.1-201ENST00000451731 511 ntBASIC19.4■□□□□ 0.7
CENPFP49454 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.4■□□□□ 0.7
CENPFP49454 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CENPFP49454 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPFP49454 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPFP49454 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
CENPFP49454 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 MIR4453-201ENST00000584019 89 ntBASIC19.4■□□□□ 0.7
CENPFP49454 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CENPFP49454 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CENPFP49454 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPFP49454 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPFP49454 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPFP49454 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPFP49454 AC138969.3-201ENST00000546612 1459 ntBASIC19.39■□□□□ 0.7
CENPFP49454 AC138932.2-201ENST00000548268 1459 ntBASIC19.39■□□□□ 0.7
CENPFP49454 AC126755.4-201ENST00000549796 1459 ntBASIC19.39■□□□□ 0.7
CENPFP49454 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CENPFP49454 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CENPFP49454 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
CENPFP49454 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.39■□□□□ 0.69
CENPFP49454 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.39■□□□□ 0.69
CENPFP49454 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CENPFP49454 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 ACTG1P4-201ENST00000425123 1122 ntBASIC19.39■□□□□ 0.69
CENPFP49454 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 AC107918.2-201ENST00000530817 355 ntBASIC19.39■□□□□ 0.69
CENPFP49454 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CENPFP49454 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.39■□□□□ 0.69
CENPFP49454 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CENPFP49454 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.39■□□□□ 0.69
CENPFP49454 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.39■□□□□ 0.69
CENPFP49454 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CENPFP49454 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.39■□□□□ 0.69
CENPFP49454 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.38■□□□□ 0.69
CENPFP49454 AL671277.1-201ENST00000429656 993 ntBASIC19.38■□□□□ 0.69
CENPFP49454 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPFP49454 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPFP49454 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPFP49454 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CENPFP49454 AC129492.6-201ENST00000611383 1305 ntBASIC19.38■□□□□ 0.69
CENPFP49454 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPFP49454 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.38■□□□□ 0.69
CENPFP49454 SLC25A6P5-201ENST00000435663 894 ntBASIC19.38■□□□□ 0.69
CENPFP49454 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.38■□□□□ 0.69
CENPFP49454 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.38■□□□□ 0.69
CENPFP49454 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CENPFP49454 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.37■□□□□ 0.69
CENPFP49454 AC073592.3-201ENST00000625118 1834 ntBASIC19.37■□□□□ 0.69
CENPFP49454 UXT-AS1-201ENST00000590504 1525 ntBASIC19.37■□□□□ 0.69
CENPFP49454 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPFP49454 DGCR5-201ENST00000399539 862 ntBASIC19.37■□□□□ 0.69
CENPFP49454 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.37■□□□□ 0.69
CENPFP49454 AC009477.1-201ENST00000452936 217 ntBASIC19.37■□□□□ 0.69
CENPFP49454 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CENPFP49454 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.37■□□□□ 0.69
CENPFP49454 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPFP49454 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.37■□□□□ 0.69
CENPFP49454 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPFP49454 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CENPFP49454 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPFP49454 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.37■□□□□ 0.69
CENPFP49454 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPFP49454 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CENPFP49454 AC009407.1-201ENST00000568958 598 ntBASIC19.37■□□□□ 0.69
CENPFP49454 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.37■□□□□ 0.69
CENPFP49454 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.37■□□□□ 0.69
CENPFP49454 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CENPFP49454 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CENPFP49454 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms