Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.28□□□□□ -0.12
NKX2-1P43699 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-1P43699 AC026691.1-201ENST00000602502 2017 ntBASIC14.28□□□□□ -0.12
NKX2-1P43699 AC046185.3-201ENST00000623228 1824 ntBASIC14.28□□□□□ -0.12
NKX2-1P43699 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-1P43699 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-1P43699 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-1P43699 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-1P43699 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX2-1P43699 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-1P43699 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NKX2-1P43699 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NKX2-1P43699 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NKX2-1P43699 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX2-1P43699 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.27□□□□□ -0.12
NKX2-1P43699 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NKX2-1P43699 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 PRORSD1P-201ENST00000295112 541 ntBASIC14.27□□□□□ -0.13
NKX2-1P43699 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NKX2-1P43699 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NKX2-1P43699 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.27□□□□□ -0.13
NKX2-1P43699 SLC25A1P2-201ENST00000430693 912 ntBASIC14.27□□□□□ -0.13
NKX2-1P43699 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX2-1P43699 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX2-1P43699 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX2-1P43699 AC142381.4-202ENST00000563973 229 ntBASIC14.27□□□□□ -0.13
NKX2-1P43699 AL353719.1-201ENST00000566847 864 ntBASIC14.27□□□□□ -0.13
NKX2-1P43699 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX2-1P43699 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX2-1P43699 AL023803.3-201ENST00000615559 522 ntBASIC14.27□□□□□ -0.13
NKX2-1P43699 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.27□□□□□ -0.13
NKX2-1P43699 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.27□□□□□ -0.13
NKX2-1P43699 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NKX2-1P43699 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 AC006449.5-201ENST00000610658 2098 ntBASIC14.27□□□□□ -0.13
NKX2-1P43699 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NKX2-1P43699 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NKX2-1P43699 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NKX2-1P43699 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NKX2-1P43699 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 AL391005.1-201ENST00000623953 2435 ntBASIC14.26□□□□□ -0.13
NKX2-1P43699 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NKX2-1P43699 KRT8P47-201ENST00000604727 1398 ntBASIC14.26□□□□□ -0.13
NKX2-1P43699 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 AC005104.2-201ENST00000427818 678 ntBASIC14.26□□□□□ -0.13
NKX2-1P43699 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.26□□□□□ -0.13
NKX2-1P43699 UBE2SP1-201ENST00000450587 669 ntBASIC14.26□□□□□ -0.13
NKX2-1P43699 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NKX2-1P43699 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.26□□□□□ -0.13
NKX2-1P43699 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NKX2-1P43699 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 PCDHB17P-201ENST00000539533 2393 ntBASIC14.26□□□□□ -0.13
NKX2-1P43699 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms