Protein–RNA interactions for Protein: P43026

GDF5, Growth/differentiation factor 5, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF5P43026 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.94■□□□□ 0.3
GDF5P43026 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.94■□□□□ 0.3
GDF5P43026 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GDF5P43026 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GDF5P43026 AC060834.1-201ENST00000443027 2032 ntBASIC16.94■□□□□ 0.3
GDF5P43026 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.94■□□□□ 0.3
GDF5P43026 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.94■□□□□ 0.3
GDF5P43026 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.94■□□□□ 0.3
GDF5P43026 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDF5P43026 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GDF5P43026 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF5P43026 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
GDF5P43026 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
GDF5P43026 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.93■□□□□ 0.3
GDF5P43026 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.93■□□□□ 0.3
GDF5P43026 SLC25A1P3-201ENST00000395415 828 ntBASIC16.93■□□□□ 0.3
GDF5P43026 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.93■□□□□ 0.3
GDF5P43026 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF5P43026 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
GDF5P43026 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.93■□□□□ 0.3
GDF5P43026 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.93■□□□□ 0.3
GDF5P43026 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF5P43026 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.93■□□□□ 0.3
GDF5P43026 AC099336.1-202ENST00000602961 463 ntBASIC16.93■□□□□ 0.3
GDF5P43026 AD001527.2-201ENST00000622994 785 ntBASIC16.93■□□□□ 0.3
GDF5P43026 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF5P43026 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.93■□□□□ 0.3
GDF5P43026 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF5P43026 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.93■□□□□ 0.3
GDF5P43026 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GDF5P43026 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 AC099398.1-201ENST00000567919 2776 ntBASIC16.93■□□□□ 0.3
GDF5P43026 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 AC093525.9-201ENST00000624961 1746 ntBASIC16.93■□□□□ 0.3
GDF5P43026 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDF5P43026 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.93■□□□□ 0.3
GDF5P43026 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.92■□□□□ 0.3
GDF5P43026 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 AC012615.1-201ENST00000565797 1299 ntBASIC16.92■□□□□ 0.3
GDF5P43026 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.92■□□□□ 0.3
GDF5P43026 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.92■□□□□ 0.3
GDF5P43026 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.92■□□□□ 0.3
GDF5P43026 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GDF5P43026 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms