Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCK1P35558 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCK1P35558 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PCK1P35558 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.33■□□□□ 0.53
PCK1P35558 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCK1P35558 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCK1P35558 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCK1P35558 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PCK1P35558 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.33■□□□□ 0.53
PCK1P35558 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCK1P35558 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PCK1P35558 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.33■□□□□ 0.52
PCK1P35558 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
PCK1P35558 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.33■□□□□ 0.52
PCK1P35558 KRT18P35-201ENST00000510488 1269 ntBASIC18.33■□□□□ 0.52
PCK1P35558 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.33■□□□□ 0.52
PCK1P35558 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.33■□□□□ 0.52
PCK1P35558 TPSP2-201ENST00000561760 610 ntBASIC18.33■□□□□ 0.52
PCK1P35558 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.33■□□□□ 0.52
PCK1P35558 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCK1P35558 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PCK1P35558 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCK1P35558 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.33■□□□□ 0.52
PCK1P35558 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PCK1P35558 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.33■□□□□ 0.52
PCK1P35558 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PCK1P35558 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCK1P35558 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.32■□□□□ 0.52
PCK1P35558 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCK1P35558 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.32■□□□□ 0.52
PCK1P35558 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCK1P35558 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.32■□□□□ 0.52
PCK1P35558 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.32■□□□□ 0.52
PCK1P35558 IGHV3-52-201ENST00000519770 353 ntBASIC18.32■□□□□ 0.52
PCK1P35558 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.32■□□□□ 0.52
PCK1P35558 AP002414.4-201ENST00000589764 1148 ntBASIC18.32■□□□□ 0.52
PCK1P35558 AC011467.2-201ENST00000598425 242 ntBASIC18.32■□□□□ 0.52
PCK1P35558 Z69720.1-201ENST00000601483 472 ntBASIC18.32■□□□□ 0.52
PCK1P35558 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 AL049757.1-201ENST00000616842 1596 ntBASIC18.32■□□□□ 0.52
PCK1P35558 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCK1P35558 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.32■□□□□ 0.52
PCK1P35558 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCK1P35558 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCK1P35558 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCK1P35558 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCK1P35558 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCK1P35558 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCK1P35558 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.31■□□□□ 0.52
PCK1P35558 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.31■□□□□ 0.52
PCK1P35558 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.31■□□□□ 0.52
PCK1P35558 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms