Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 MIR943-201ENST00000401286 94 ntBASIC18.72■□□□□ 0.59
RFC2P35250 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC2P35250 AC015922.1-201ENST00000421102 1152 ntBASIC18.72■□□□□ 0.59
RFC2P35250 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.72■□□□□ 0.59
RFC2P35250 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.72■□□□□ 0.59
RFC2P35250 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.72■□□□□ 0.59
RFC2P35250 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.72■□□□□ 0.59
RFC2P35250 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFC2P35250 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.72■□□□□ 0.59
RFC2P35250 MIR4515-201ENST00000584082 81 ntBASIC18.72■□□□□ 0.59
RFC2P35250 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 AL035252.4-201ENST00000624174 288 ntBASIC18.72■□□□□ 0.59
RFC2P35250 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RFC2P35250 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RFC2P35250 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RFC2P35250 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RFC2P35250 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC2P35250 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RFC2P35250 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.72■□□□□ 0.59
RFC2P35250 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RFC2P35250 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 KRT18P55-202ENST00000578578 1546 ntBASIC18.71■□□□□ 0.59
RFC2P35250 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC2P35250 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
RFC2P35250 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 AC107890.1-201ENST00000422478 521 ntBASIC18.71■□□□□ 0.59
RFC2P35250 AC005034.1-201ENST00000426657 489 ntBASIC18.71■□□□□ 0.59
RFC2P35250 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC2P35250 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.71■□□□□ 0.59
RFC2P35250 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RFC2P35250 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC2P35250 AC107918.2-201ENST00000530817 355 ntBASIC18.71■□□□□ 0.59
RFC2P35250 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.71■□□□□ 0.59
RFC2P35250 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.71■□□□□ 0.59
RFC2P35250 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RFC2P35250 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RFC2P35250 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RFC2P35250 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RFC2P35250 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.71■□□□□ 0.59
RFC2P35250 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
RFC2P35250 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
RFC2P35250 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC2P35250 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC2P35250 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.7■□□□□ 0.58
RFC2P35250 FAM58DP-201ENST00000428076 619 ntBASIC18.7■□□□□ 0.58
RFC2P35250 AC002472.2-201ENST00000442739 958 ntBASIC18.7■□□□□ 0.58
RFC2P35250 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC2P35250 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC2P35250 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.7■□□□□ 0.58
RFC2P35250 KRT8P23-201ENST00000560090 1207 ntBASIC18.7■□□□□ 0.58
RFC2P35250 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.7■□□□□ 0.58
RFC2P35250 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFC2P35250 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.7■□□□□ 0.58
RFC2P35250 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFC2P35250 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC2P35250 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.69■□□□□ 0.58
RFC2P35250 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.69■□□□□ 0.58
RFC2P35250 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RFC2P35250 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFC2P35250 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC2P35250 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.69■□□□□ 0.58
RFC2P35250 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC2P35250 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFC2P35250 GPS2P2-201ENST00000430745 888 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms