Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RPA3P35244 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RPA3P35244 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 AC008741.2-201ENST00000612792 3115 ntBASIC17.6■□□□□ 0.41
RPA3P35244 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 ARMC10P1-201ENST00000313754 855 ntBASIC17.6■□□□□ 0.41
RPA3P35244 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 AL031133.1-201ENST00000406807 723 ntBASIC17.6■□□□□ 0.41
RPA3P35244 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.6■□□□□ 0.41
RPA3P35244 KRT18P35-201ENST00000510488 1269 ntBASIC17.6■□□□□ 0.41
RPA3P35244 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.6■□□□□ 0.41
RPA3P35244 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 LINC02199-201ENST00000506655 2702 ntBASIC17.6■□□□□ 0.41
RPA3P35244 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RPA3P35244 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPA3P35244 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RPA3P35244 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.59■□□□□ 0.41
RPA3P35244 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.59■□□□□ 0.41
RPA3P35244 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.59■□□□□ 0.41
RPA3P35244 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RPA3P35244 AP003733.1-201ENST00000491725 852 ntBASIC17.59■□□□□ 0.41
RPA3P35244 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.59■□□□□ 0.41
RPA3P35244 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.59■□□□□ 0.41
RPA3P35244 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.59■□□□□ 0.41
RPA3P35244 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RPA3P35244 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.59■□□□□ 0.41
RPA3P35244 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RPA3P35244 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.59■□□□□ 0.41
RPA3P35244 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.59■□□□□ 0.41
RPA3P35244 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPA3P35244 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPA3P35244 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RPA3P35244 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.58■□□□□ 0.41
RPA3P35244 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.58■□□□□ 0.41
RPA3P35244 KRT89P-201ENST00000620027 1478 ntBASIC17.58■□□□□ 0.41
RPA3P35244 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RPA3P35244 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPA3P35244 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RPA3P35244 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
RPA3P35244 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.58■□□□□ 0.4
RPA3P35244 MIR662-201ENST00000384847 95 ntBASIC17.58■□□□□ 0.4
RPA3P35244 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.58■□□□□ 0.4
RPA3P35244 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.58■□□□□ 0.4
RPA3P35244 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.58■□□□□ 0.4
RPA3P35244 AL445228.2-201ENST00000605589 952 ntBASIC17.58■□□□□ 0.4
RPA3P35244 AL121956.5-201ENST00000625261 221 ntBASIC17.58■□□□□ 0.4
RPA3P35244 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.58■□□□□ 0.4
RPA3P35244 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.58■□□□□ 0.4
RPA3P35244 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.58■□□□□ 0.4
RPA3P35244 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPA3P35244 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPA3P35244 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms