Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHRNA3P32297 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA3P32297 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA3P32297 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA3P32297 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHRNA3P32297 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA3P32297 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA3P32297 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CHRNA3P32297 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.34■□□□□ 0.53
CHRNA3P32297 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA3P32297 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA3P32297 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 AC233702.3-201ENST00000578656 1387 ntBASIC18.34■□□□□ 0.53
CHRNA3P32297 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 NUS1P1-201ENST00000446295 882 ntBASIC18.34■□□□□ 0.53
CHRNA3P32297 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.34■□□□□ 0.53
CHRNA3P32297 AC012615.1-201ENST00000565797 1299 ntBASIC18.34■□□□□ 0.53
CHRNA3P32297 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHRNA3P32297 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA3P32297 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA3P32297 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA3P32297 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA3P32297 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHRNA3P32297 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRNA3P32297 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CHRNA3P32297 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CHRNA3P32297 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA3P32297 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRNA3P32297 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRNA3P32297 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRNA3P32297 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRNA3P32297 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRNA3P32297 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA3P32297 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 TSPY12P-201ENST00000421279 868 ntBASIC18.33■□□□□ 0.52
CHRNA3P32297 AGGF1P2-201ENST00000426656 2106 ntBASIC18.33■□□□□ 0.52
CHRNA3P32297 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNA3P32297 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNA3P32297 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA3P32297 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA3P32297 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.33■□□□□ 0.52
CHRNA3P32297 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNA3P32297 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA3P32297 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CHRNA3P32297 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 AC060834.1-201ENST00000443027 2032 ntBASIC18.33■□□□□ 0.52
CHRNA3P32297 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHRNA3P32297 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA3P32297 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA3P32297 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA3P32297 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHRNA3P32297 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 AC116353.5-201ENST00000638148 1699 ntBASIC18.32■□□□□ 0.52
CHRNA3P32297 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA3P32297 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA3P32297 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA3P32297 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms