Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA13P31271 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.76■□□□□ 0.75
HOXA13P31271 MIR4751-201ENST00000578027 74 ntBASIC19.76■□□□□ 0.75
HOXA13P31271 AC064836.3-201ENST00000607928 673 ntBASIC19.76■□□□□ 0.75
HOXA13P31271 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA13P31271 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HOXA13P31271 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HOXA13P31271 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HOXA13P31271 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXA13P31271 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXA13P31271 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXA13P31271 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HOXA13P31271 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HOXA13P31271 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA13P31271 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HOXA13P31271 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXA13P31271 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HOXA13P31271 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA13P31271 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXA13P31271 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA13P31271 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXA13P31271 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXA13P31271 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXA13P31271 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXA13P31271 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
HOXA13P31271 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXA13P31271 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXA13P31271 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
HOXA13P31271 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA13P31271 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA13P31271 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HOXA13P31271 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXA13P31271 AC092865.5-201ENST00000545435 363 ntBASIC19.74■□□□□ 0.75
HOXA13P31271 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA13P31271 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
HOXA13P31271 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
HOXA13P31271 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXA13P31271 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HOXA13P31271 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXA13P31271 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 GNAS-203ENST00000306120 1878 ntBASIC19.73■□□□□ 0.75
HOXA13P31271 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA13P31271 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA13P31271 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 AP002414.1-201ENST00000391405 1147 ntBASIC19.73■□□□□ 0.75
HOXA13P31271 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXA13P31271 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 RNA5SP416-201ENST00000516838 111 ntBASIC19.73■□□□□ 0.75
HOXA13P31271 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.73■□□□□ 0.75
HOXA13P31271 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA13P31271 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HOXA13P31271 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA13P31271 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HOXA13P31271 PI4KAP1-204ENST00000612579 1703 ntBASIC19.73■□□□□ 0.75
HOXA13P31271 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXA13P31271 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXA13P31271 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms