Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MRPS18AP1-201ENST00000414458 589 ntBASIC21.4■■□□□ 1.02
TM4SF1P30408 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.4■■□□□ 1.02
TM4SF1P30408 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.4■■□□□ 1.02
TM4SF1P30408 AC069120.2-201ENST00000524091 540 ntBASIC21.4■■□□□ 1.02
TM4SF1P30408 AC109635.5-201ENST00000533593 962 ntBASIC21.4■■□□□ 1.02
TM4SF1P30408 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.4■■□□□ 1.02
TM4SF1P30408 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TM4SF1P30408 GNAS-203ENST00000306120 1878 ntBASIC21.4■■□□□ 1.02
TM4SF1P30408 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
TM4SF1P30408 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TM4SF1P30408 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.4■■□□□ 1.02
TM4SF1P30408 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.4■■□□□ 1.02
TM4SF1P30408 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TM4SF1P30408 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TM4SF1P30408 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.39■■□□□ 1.02
TM4SF1P30408 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TM4SF1P30408 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
TM4SF1P30408 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TM4SF1P30408 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TM4SF1P30408 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TM4SF1P30408 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TM4SF1P30408 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.39■■□□□ 1.02
TM4SF1P30408 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
TM4SF1P30408 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.39■■□□□ 1.02
TM4SF1P30408 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
TM4SF1P30408 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TM4SF1P30408 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TM4SF1P30408 AL512638.1-201ENST00000457493 794 ntBASIC21.39■■□□□ 1.01
TM4SF1P30408 AC004890.2-204ENST00000481968 304 ntBASIC21.39■■□□□ 1.01
TM4SF1P30408 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.39■■□□□ 1.01
TM4SF1P30408 ALG1L8P-201ENST00000533887 760 ntBASIC21.39■■□□□ 1.01
TM4SF1P30408 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.39■■□□□ 1.01
TM4SF1P30408 CR383656.12-201ENST00000549567 513 ntBASIC21.39■■□□□ 1.01
TM4SF1P30408 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
TM4SF1P30408 AC005412.3-201ENST00000580309 715 ntBASIC21.39■■□□□ 1.01
TM4SF1P30408 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.39■■□□□ 1.01
TM4SF1P30408 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.39■■□□□ 1.01
TM4SF1P30408 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TM4SF1P30408 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TM4SF1P30408 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.39■■□□□ 1.01
TM4SF1P30408 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TM4SF1P30408 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TM4SF1P30408 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
TM4SF1P30408 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TM4SF1P30408 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 TNXA-203ENST00000507684 2038 ntBASIC21.38■■□□□ 1.01
TM4SF1P30408 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.38■■□□□ 1.01
TM4SF1P30408 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.38■■□□□ 1.01
TM4SF1P30408 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.38■■□□□ 1.01
TM4SF1P30408 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.38■■□□□ 1.01
TM4SF1P30408 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.38■■□□□ 1.01
TM4SF1P30408 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.38■■□□□ 1.01
TM4SF1P30408 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TM4SF1P30408 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.38■■□□□ 1.01
TM4SF1P30408 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TM4SF1P30408 AC012569.1-201ENST00000591191 1524 ntBASIC21.38■■□□□ 1.01
TM4SF1P30408 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.38■■□□□ 1.01
TM4SF1P30408 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.37■■□□□ 1.01
TM4SF1P30408 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TM4SF1P30408 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF1P30408 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.37■■□□□ 1.01
TM4SF1P30408 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF1P30408 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF1P30408 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TM4SF1P30408 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.37■■□□□ 1.01
TM4SF1P30408 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.37■■□□□ 1.01
TM4SF1P30408 SERBP1P5-201ENST00000510079 1181 ntBASIC21.37■■□□□ 1.01
TM4SF1P30408 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.37■■□□□ 1.01
TM4SF1P30408 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.37■■□□□ 1.01
TM4SF1P30408 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.37■■□□□ 1.01
TM4SF1P30408 SPDYE22P-201ENST00000582158 798 ntBASIC21.37■■□□□ 1.01
TM4SF1P30408 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF1P30408 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
TM4SF1P30408 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF1P30408 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF1P30408 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.37■■□□□ 1.01
TM4SF1P30408 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TM4SF1P30408 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TM4SF1P30408 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TM4SF1P30408 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.36■■□□□ 1.01
TM4SF1P30408 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
TM4SF1P30408 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TM4SF1P30408 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms