Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PTPN6P29350 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 KRT18P1-202ENST00000452408 1331 ntBASIC16.5■□□□□ 0.23
PTPN6P29350 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTPN6P29350 BCL2-203ENST00000589955 5011 ntBASIC16.5■□□□□ 0.23
PTPN6P29350 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN6P29350 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN6P29350 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN6P29350 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN6P29350 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN6P29350 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN6P29350 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTPN6P29350 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN6P29350 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 KRT18P56-201ENST00000507275 550 ntBASIC16.5■□□□□ 0.23
PTPN6P29350 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.5■□□□□ 0.23
PTPN6P29350 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN6P29350 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN6P29350 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.5■□□□□ 0.23
PTPN6P29350 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
PTPN6P29350 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN6P29350 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.5■□□□□ 0.23
PTPN6P29350 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN6P29350 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN6P29350 UBALD1-205ENST00000590891 2641 ntBASIC16.49■□□□□ 0.23
PTPN6P29350 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN6P29350 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN6P29350 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN6P29350 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PTPN6P29350 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PTPN6P29350 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN6P29350 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN6P29350 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTPN6P29350 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 GUSBP12-201ENST00000513727 720 ntBASIC16.49■□□□□ 0.23
PTPN6P29350 TPSP2-201ENST00000561760 610 ntBASIC16.49■□□□□ 0.23
PTPN6P29350 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PTPN6P29350 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.49■□□□□ 0.23
PTPN6P29350 AC092329.2-201ENST00000598402 547 ntBASIC16.49■□□□□ 0.23
PTPN6P29350 AL353801.3-201ENST00000609898 542 ntBASIC16.49■□□□□ 0.23
PTPN6P29350 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 IGHV3-41-201ENST00000613121 348 ntBASIC16.49■□□□□ 0.23
PTPN6P29350 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN6P29350 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PTPN6P29350 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PTPN6P29350 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN6P29350 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.49■□□□□ 0.23
PTPN6P29350 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.49■□□□□ 0.23
PTPN6P29350 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
PTPN6P29350 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PTPN6P29350 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTPN6P29350 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN6P29350 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PTPN6P29350 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN6P29350 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN6P29350 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PTPN6P29350 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms