Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.47■■□□□ 1.19
RXRBP28702 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RXRBP28702 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RXRBP28702 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC22.47■■□□□ 1.19
RXRBP28702 CENPM-206ENST00000407253 818 ntTSL 2 BASIC22.47■■□□□ 1.19
RXRBP28702 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.47■■□□□ 1.19
RXRBP28702 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.47■■□□□ 1.19
RXRBP28702 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC22.47■■□□□ 1.19
RXRBP28702 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC22.47■■□□□ 1.19
RXRBP28702 CTBP2P3-201ENST00000585629 1255 ntBASIC22.47■■□□□ 1.19
RXRBP28702 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC22.47■■□□□ 1.19
RXRBP28702 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
RXRBP28702 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
RXRBP28702 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.47■■□□□ 1.19
RXRBP28702 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RXRBP28702 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RXRBP28702 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RXRBP28702 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RXRBP28702 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC22.46■■□□□ 1.19
RXRBP28702 AC108725.1-201ENST00000495472 409 ntBASIC22.46■■□□□ 1.19
RXRBP28702 ZNF890P-202ENST00000530367 1156 ntBASIC22.46■■□□□ 1.19
RXRBP28702 AC055876.2-201ENST00000531834 546 ntBASIC22.46■■□□□ 1.19
RXRBP28702 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC22.46■■□□□ 1.19
RXRBP28702 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RXRBP28702 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.46■■□□□ 1.19
RXRBP28702 SNX1-214ENST00000625244 324 ntTSL 5 BASIC22.46■■□□□ 1.19
RXRBP28702 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.46■■□□□ 1.19
RXRBP28702 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
RXRBP28702 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RXRBP28702 AC006538.1-201ENST00000567905 1585 ntBASIC22.46■■□□□ 1.19
RXRBP28702 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.46■■□□□ 1.19
RXRBP28702 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.45■■□□□ 1.19
RXRBP28702 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.19
RXRBP28702 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 AC007375.3-201ENST00000600936 2314 ntBASIC22.45■■□□□ 1.18
RXRBP28702 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.45■■□□□ 1.18
RXRBP28702 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC22.45■■□□□ 1.18
RXRBP28702 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC22.45■■□□□ 1.18
RXRBP28702 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC22.45■■□□□ 1.18
RXRBP28702 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
RXRBP28702 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC22.45■■□□□ 1.18
RXRBP28702 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC22.45■■□□□ 1.18
RXRBP28702 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC22.45■■□□□ 1.18
RXRBP28702 WNT11-204ENST00000621122 789 ntTSL 5 BASIC22.45■■□□□ 1.18
RXRBP28702 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.45■■□□□ 1.18
RXRBP28702 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.45■■□□□ 1.18
RXRBP28702 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RXRBP28702 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.45■■□□□ 1.18
RXRBP28702 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.44■■□□□ 1.18
RXRBP28702 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.44■■□□□ 1.18
RXRBP28702 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC22.44■■□□□ 1.18
RXRBP28702 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
RXRBP28702 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC22.44■■□□□ 1.18
RXRBP28702 MTND6P24-201ENST00000440466 518 ntBASIC22.44■■□□□ 1.18
RXRBP28702 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 ELK1P1-201ENST00000485699 580 ntBASIC22.44■■□□□ 1.18
RXRBP28702 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.44■■□□□ 1.18
RXRBP28702 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.44■■□□□ 1.18
RXRBP28702 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RXRBP28702 RPS24-214ENST00000613865 538 ntTSL 5 BASIC22.44■■□□□ 1.18
RXRBP28702 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RXRBP28702 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RXRBP28702 AL161938.1-201ENST00000569833 2180 ntBASIC22.43■■□□□ 1.18
RXRBP28702 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.43■■□□□ 1.18
RXRBP28702 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.43■■□□□ 1.18
RXRBP28702 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RXRBP28702 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RXRBP28702 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RXRBP28702 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RXRBP28702 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RXRBP28702 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC22.43■■□□□ 1.18
RXRBP28702 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RXRBP28702 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
RXRBP28702 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC22.43■■□□□ 1.18
RXRBP28702 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC22.43■■□□□ 1.18
RXRBP28702 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC22.43■■□□□ 1.18
RXRBP28702 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms