Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCND1P24385 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCND1P24385 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCND1P24385 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CCND1P24385 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 AL603756.1-201ENST00000606511 2163 ntBASIC17.55■□□□□ 0.4
CCND1P24385 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 MIR662-201ENST00000384847 95 ntBASIC17.55■□□□□ 0.4
CCND1P24385 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.55■□□□□ 0.4
CCND1P24385 AL671277.2-201ENST00000458060 996 ntBASIC17.55■□□□□ 0.4
CCND1P24385 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.55■□□□□ 0.4
CCND1P24385 HYMAI.1-201ENST00000620949 238 ntBASIC17.55■□□□□ 0.4
CCND1P24385 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.55■□□□□ 0.4
CCND1P24385 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.55■□□□□ 0.4
CCND1P24385 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCND1P24385 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.54■□□□□ 0.4
CCND1P24385 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.54■□□□□ 0.4
CCND1P24385 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.54■□□□□ 0.4
CCND1P24385 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.54■□□□□ 0.4
CCND1P24385 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
CCND1P24385 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CCND1P24385 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CCND1P24385 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCND1P24385 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.54■□□□□ 0.4
CCND1P24385 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.53■□□□□ 0.4
CCND1P24385 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCND1P24385 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 KRT18P55-202ENST00000578578 1546 ntBASIC17.53■□□□□ 0.4
CCND1P24385 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms