Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PIGT-270ENST00000640940 1764 ntTSL 512.14□□□□□ -0.479e-8■■■□□ 15.8
RPS3P23396 PIGT-243ENST00000639292 1938 ntTSL 511.88□□□□□ -0.519e-8■■■□□ 15.8
RPS3P23396 PIGT-262ENST00000640542 2169 ntTSL 511.56□□□□□ -0.569e-8■■■□□ 15.8
RPS3P23396 PIGT-234ENST00000638962 2090 ntTSL 511.21□□□□□ -0.629e-8■■■□□ 15.8
RPS3P23396 PIGT-247ENST00000639664 1878 ntTSL 511.15□□□□□ -0.639e-8■■■□□ 15.8
RPS3P23396 PIGT-216ENST00000638415 1738 ntTSL 511.11□□□□□ -0.639e-8■■■□□ 15.8
RPS3P23396 PIGT-249ENST00000639872 1498 ntTSL 210.52□□□□□ -0.739e-8■■■□□ 15.8
RPS3P23396 PIGT-225ENST00000638689 4314 ntTSL 59.9□□□□□ -0.839e-8■■■□□ 15.8
RPS3P23396 PIGT-229ENST00000638745 6087 ntTSL 59.64□□□□□ -0.879e-8■■■□□ 15.8
RPS3P23396 PIGT-212ENST00000638277 879 ntTSL 58.45□□□□□ -1.069e-8■■■□□ 15.8
RPS3P23396 PIGT-241ENST00000639250 3363 ntTSL 58.18□□□□□ -1.19e-8■■■□□ 15.8
RPS3P23396 QARS-205ENST00000430182 2399 ntTSL 212.18□□□□□ -0.461e-7■■■□□ 15.7
RPS3P23396 QARS-251ENST00000637543 2074 ntTSL 512.15□□□□□ -0.461e-7■■■□□ 15.7
RPS3P23396 QARS-202ENST00000414533 2412 ntTSL 2 BASIC12.14□□□□□ -0.471e-7■■■□□ 15.7
RPS3P23396 QARS-248ENST00000636669 2410 ntTSL 512□□□□□ -0.491e-7■■■□□ 15.7
RPS3P23396 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC10.62□□□□□ -0.711e-7■■■□□ 15.7
RPS3P23396 QARS-247ENST00000636018 2171 ntTSL 510.58□□□□□ -0.721e-7■■■□□ 15.7
RPS3P23396 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.791e-7■■■□□ 15.7
RPS3P23396 LMNA-220ENST00000504687 546 ntTSL 413.26□□□□□ -0.296e-9■■■□□ 15.7
RPS3P23396 MZT2B-206ENST00000480182 480 ntTSL 1 (best)18.7■□□□□ 0.583e-16■■■□□ 15.7
RPS3P23396 LSR-208ENST00000599658 343 ntTSL 311.37□□□□□ -0.596e-10■■■□□ 15.7
RPS3P23396 BRIX1-204ENST00000510960 1161 ntTSL 214.7□□□□□ -0.066e-8■■■□□ 15.7
RPS3P23396 BRIX1-203ENST00000510834 2380 ntTSL 1 (best)10.37□□□□□ -0.756e-8■■■□□ 15.7
RPS3P23396 BRIX1-202ENST00000506023 743 ntTSL 39.75□□□□□ -0.856e-8■■■□□ 15.7
RPS3P23396 TKT-204ENST00000450814 1941 ntTSL 217.53■□□□□ 0.44e-7■■■□□ 15.7
RPS3P23396 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.72■□□□□ 0.114e-7■■■□□ 15.7
RPS3P23396 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.62□□□□□ -0.074e-7■■■□□ 15.7
RPS3P23396 TKT-210ENST00000469678 1871 ntTSL 514.61□□□□□ -0.074e-7■■■□□ 15.7
RPS3P23396 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.424e-7■■■□□ 15.7
RPS3P23396 TKT-208ENST00000462138 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.564e-7■■■□□ 15.7
RPS3P23396 CIAO1-202ENST00000469320 565 ntTSL 419.01■□□□□ 0.639e-7■■■□□ 15.7
RPS3P23396 CIAO1-204ENST00000491394 748 ntTSL 216.21■□□□□ 0.199e-7■■■□□ 15.7
RPS3P23396 MRPL37-203ENST00000398219 868 ntTSL 313.14□□□□□ -0.315e-6■■■□□ 15.7
RPS3P23396 NCLN-204ENST00000588428 1080 ntTSL 520.38■□□□□ 0.857e-7■■■□□ 15.7
RPS3P23396 PIH1D1-218ENST00000599791 966 ntTSL 215.6■□□□□ 0.093e-21■■■□□ 15.7
RPS3P23396 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.76■□□□□ 0.912e-29■■■□□ 15.7
RPS3P23396 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.42■□□□□ 0.862e-29■■■□□ 15.7
RPS3P23396 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.89■□□□□ 0.612e-29■■■□□ 15.7
RPS3P23396 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.342e-29■■■□□ 15.7
RPS3P23396 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.045e-8■■■□□ 15.7
RPS3P23396 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.875e-8■■■□□ 15.7
RPS3P23396 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.785e-8■■■□□ 15.7
RPS3P23396 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.745e-8■■■□□ 15.7
RPS3P23396 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.735e-8■■■□□ 15.7
RPS3P23396 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.155e-8■■■□□ 15.7
RPS3P23396 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.115e-8■■■□□ 15.7
RPS3P23396 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.37■□□□□ 0.212e-6■■■□□ 15.7
RPS3P23396 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.132e-6■■■□□ 15.7
RPS3P23396 TMEM97-204ENST00000582384 1075 ntTSL 311.37□□□□□ -0.592e-6■■■□□ 15.7
RPS3P23396 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.293e-7■■■□□ 15.7
RPS3P23396 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.572e-7■■■□□ 15.7
RPS3P23396 ITGA5-202ENST00000435631 1240 ntTSL 214.55□□□□□ -0.081e-9■■■□□ 15.7
RPS3P23396 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.381e-9■■■□□ 15.7
RPS3P23396 ATP5L-203ENST00000527186 1582 ntTSL 24.3□□□□□ -1.723e-14■■■□□ 15.7
RPS3P23396 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.154e-7■■■□□ 15.7
RPS3P23396 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.97□□□□□ -0.174e-7■■■□□ 15.7
RPS3P23396 TMBIM6-221ENST00000550040 952 ntTSL 25.59□□□□□ -1.515e-27■■■□□ 15.7
RPS3P23396 TMBIM6-219ENST00000549471 484 ntTSL 24.37□□□□□ -1.715e-27■■■□□ 15.7
RPS3P23396 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.647e-7■■■□□ 15.7
RPS3P23396 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.417e-7■■■□□ 15.7
RPS3P23396 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.58■□□□□ 0.087e-7■■■□□ 15.7
RPS3P23396 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 07e-7■■■□□ 15.7
RPS3P23396 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.127e-7■■■□□ 15.7
RPS3P23396 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.177e-7■■■□□ 15.7
RPS3P23396 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.542e-7■■■□□ 15.7
RPS3P23396 KRT8-213ENST00000550170 2202 ntTSL 517.64■□□□□ 0.422e-7■■■□□ 15.7
RPS3P23396 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.322e-7■■■□□ 15.7
RPS3P23396 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.84■□□□□ 0.132e-7■■■□□ 15.7
RPS3P23396 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.062e-7■■■□□ 15.7
RPS3P23396 KRT8-203ENST00000546583 2862 ntTSL 514.39□□□□□ -0.112e-7■■■□□ 15.7
RPS3P23396 CPVL-212ENST00000488891 696 ntTSL 515.83■□□□□ 0.122e-7■■■□□ 15.7
RPS3P23396 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.87■□□□□ 0.457e-9■■■□□ 15.7
RPS3P23396 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.047e-9■■■□□ 15.7
RPS3P23396 CTSH-203ENST00000527138 798 ntTSL 416.36■□□□□ 0.217e-8■■■□□ 15.7
RPS3P23396 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.94□□□□□ -0.343e-8■■■□□ 15.7
RPS3P23396 MARS-220ENST00000549827 465 ntTSL 211.75□□□□□ -0.532e-18■■■□□ 15.7
RPS3P23396 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.262e-7■■■□□ 15.7
RPS3P23396 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.272e-7■■■□□ 15.7
RPS3P23396 ACAA1-216ENST00000480865 1540 ntTSL 514.98□□□□□ -0.017e-7■■■□□ 15.7
RPS3P23396 ACAA1-211ENST00000452171 927 ntTSL 311.98□□□□□ -0.497e-7■■■□□ 15.7
RPS3P23396 ACAA1-214ENST00000469559 4720 ntTSL 211.86□□□□□ -0.517e-7■■■□□ 15.7
RPS3P23396 DDB1-212ENST00000538470 858 ntTSL 28.31□□□□□ -1.081e-7■■■□□ 15.7
RPS3P23396 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.48□□□□□ -0.252e-6■■■□□ 15.7
RPS3P23396 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC11.43□□□□□ -0.582e-6■■■□□ 15.7
RPS3P23396 AC005381.1-202ENST00000592716 574 ntTSL 56.02□□□□□ -1.452e-6■■■□□ 15.7
RPS3P23396 RPL35A-204ENST00000442341 517 ntTSL 34.23□□□□□ -1.734e-18■■■□□ 15.7
RPS3P23396 BIRC5-208ENST00000590925 648 ntTSL 1 (best)17.28■□□□□ 0.363e-13■■■□□ 15.7
RPS3P23396 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.92■□□□□ 0.33e-13■■■□□ 15.7
RPS3P23396 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.7□□□□□ -0.063e-13■■■□□ 15.7
RPS3P23396 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.343e-13■■■□□ 15.7
RPS3P23396 GAPVD1-220ENST00000497580 3720 ntTSL 212.77□□□□□ -0.375e-28■■■□□ 15.7
RPS3P23396 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.76□□□□□ -0.373e-13■■■□□ 15.7
RPS3P23396 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC11.38□□□□□ -0.593e-13■■■□□ 15.7
RPS3P23396 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC9.21□□□□□ -0.935e-28■■■□□ 15.7
RPS3P23396 HNRNPL-205ENST00000595804 588 ntTSL 29.03□□□□□ -0.963e-13■■■□□ 15.7
RPS3P23396 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.27□□□□□ -1.095e-28■■■□□ 15.7
RPS3P23396 GAPVD1-209ENST00000436712 2490 ntTSL 57.81□□□□□ -1.165e-28■■■□□ 15.7
RPS3P23396 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.215e-28■■■□□ 15.7
RPS3P23396 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.32□□□□□ -1.245e-28■■■□□ 15.7
RPS3P23396 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.89□□□□□ -1.315e-28■■■□□ 15.7
Retrieved 100 of 24,271 protein–RNA pairs in 328 ms