Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN3P20807 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CAPN3P20807 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN3P20807 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN3P20807 AL359075.1-203ENST00000462729 1002 ntBASIC16.76■□□□□ 0.27
CAPN3P20807 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.76■□□□□ 0.27
CAPN3P20807 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.76■□□□□ 0.27
CAPN3P20807 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.76■□□□□ 0.27
CAPN3P20807 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CAPN3P20807 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CAPN3P20807 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN3P20807 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN3P20807 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CAPN3P20807 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CAPN3P20807 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPN3P20807 TSPY12P-201ENST00000421279 868 ntBASIC16.75■□□□□ 0.27
CAPN3P20807 ATP5G2P1-201ENST00000433580 426 ntBASIC16.75■□□□□ 0.27
CAPN3P20807 AC034232.1-201ENST00000506026 1064 ntBASIC16.75■□□□□ 0.27
CAPN3P20807 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPN3P20807 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPN3P20807 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.75■□□□□ 0.27
CAPN3P20807 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CAPN3P20807 AL136038.4-201ENST00000603606 1261 ntBASIC16.75■□□□□ 0.27
CAPN3P20807 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CAPN3P20807 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.75■□□□□ 0.27
CAPN3P20807 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CAPN3P20807 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CAPN3P20807 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CAPN3P20807 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.75■□□□□ 0.27
CAPN3P20807 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN3P20807 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CAPN3P20807 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.74■□□□□ 0.27
CAPN3P20807 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 RNF216P1-203ENST00000404404 2427 ntBASIC16.74■□□□□ 0.27
CAPN3P20807 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CAPN3P20807 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.74■□□□□ 0.27
CAPN3P20807 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.74■□□□□ 0.27
CAPN3P20807 RASA4DP-201ENST00000460726 1199 ntBASIC16.74■□□□□ 0.27
CAPN3P20807 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.74■□□□□ 0.27
CAPN3P20807 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.74■□□□□ 0.27
CAPN3P20807 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms