Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NELFEP18615 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NELFEP18615 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.23■□□□□ 0.35
NELFEP18615 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NELFEP18615 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.23■□□□□ 0.35
NELFEP18615 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.23■□□□□ 0.35
NELFEP18615 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.23■□□□□ 0.35
NELFEP18615 AC009533.2-201ENST00000543664 586 ntBASIC17.23■□□□□ 0.35
NELFEP18615 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 TP73-AS1-210ENST00000637775 1455 ntBASIC17.23■□□□□ 0.35
NELFEP18615 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.23■□□□□ 0.35
NELFEP18615 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NELFEP18615 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.22■□□□□ 0.35
NELFEP18615 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NELFEP18615 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NELFEP18615 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.22■□□□□ 0.35
NELFEP18615 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.22■□□□□ 0.35
NELFEP18615 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
NELFEP18615 SLC25A6P5-201ENST00000435663 894 ntBASIC17.22■□□□□ 0.35
NELFEP18615 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.22■□□□□ 0.35
NELFEP18615 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.22■□□□□ 0.35
NELFEP18615 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NELFEP18615 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 AP002469.2-201ENST00000531724 424 ntBASIC17.22■□□□□ 0.35
NELFEP18615 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.22■□□□□ 0.35
NELFEP18615 AL138831.2-201ENST00000606564 490 ntBASIC17.22■□□□□ 0.35
NELFEP18615 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NELFEP18615 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.22■□□□□ 0.35
NELFEP18615 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NELFEP18615 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NELFEP18615 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NELFEP18615 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NELFEP18615 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NELFEP18615 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NELFEP18615 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFEP18615 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFEP18615 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NELFEP18615 RCN1P2-201ENST00000398357 915 ntBASIC17.21■□□□□ 0.35
NELFEP18615 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.21■□□□□ 0.35
NELFEP18615 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFEP18615 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 AF238378.1-201ENST00000526806 358 ntBASIC17.21■□□□□ 0.35
NELFEP18615 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.21■□□□□ 0.35
NELFEP18615 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.21■□□□□ 0.35
NELFEP18615 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.21■□□□□ 0.35
NELFEP18615 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
NELFEP18615 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NELFEP18615 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms