Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.98■□□□□ 0.31
PCNAP12004 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCNAP12004 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCNAP12004 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNAP12004 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCNAP12004 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCNAP12004 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCNAP12004 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.97■□□□□ 0.31
PCNAP12004 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCNAP12004 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 AL845331.1-201ENST00000424978 1190 ntBASIC16.97■□□□□ 0.31
PCNAP12004 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 TSSC2-201ENST00000450217 709 ntBASIC16.97■□□□□ 0.31
PCNAP12004 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.97■□□□□ 0.31
PCNAP12004 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCNAP12004 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCNAP12004 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.97■□□□□ 0.31
PCNAP12004 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
PCNAP12004 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.97■□□□□ 0.31
PCNAP12004 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCNAP12004 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.96■□□□□ 0.31
PCNAP12004 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.96■□□□□ 0.31
PCNAP12004 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.96■□□□□ 0.31
PCNAP12004 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PCNAP12004 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.96■□□□□ 0.31
PCNAP12004 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCNAP12004 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCNAP12004 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.96■□□□□ 0.31
PCNAP12004 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCNAP12004 AC007967.3-201ENST00000434308 558 ntBASIC16.96■□□□□ 0.31
PCNAP12004 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCNAP12004 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.96■□□□□ 0.31
PCNAP12004 AC005336.2-201ENST00000593183 939 ntBASIC16.96■□□□□ 0.31
PCNAP12004 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCNAP12004 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.96■□□□□ 0.31
PCNAP12004 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCNAP12004 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.96■□□□□ 0.31
PCNAP12004 CROCCP2-202ENST00000412962 2773 ntBASIC16.96■□□□□ 0.31
PCNAP12004 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCNAP12004 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCNAP12004 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCNAP12004 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCNAP12004 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCNAP12004 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.96■□□□□ 0.3
PCNAP12004 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCNAP12004 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCNAP12004 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.96■□□□□ 0.3
PCNAP12004 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.96■□□□□ 0.3
PCNAP12004 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.96■□□□□ 0.3
PCNAP12004 AC097374.2-201ENST00000618617 1306 ntBASIC16.96■□□□□ 0.3
PCNAP12004 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCNAP12004 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCNAP12004 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms