Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 TFAMP1-201ENST00000412727 736 ntBASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 AL645728.2-201ENST00000641974 660 ntBASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.9■■□□□ 1.26
CSB-PGBD3P0DP91 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.89■■□□□ 1.26
CSB-PGBD3P0DP91 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.89■■□□□ 1.26
CSB-PGBD3P0DP91 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
CSB-PGBD3P0DP91 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSB-PGBD3P0DP91 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.89■■□□□ 1.26
CSB-PGBD3P0DP91 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSB-PGBD3P0DP91 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC22.89■■□□□ 1.26
CSB-PGBD3P0DP91 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC22.89■■□□□ 1.25
CSB-PGBD3P0DP91 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 BASP1P1-201ENST00000430708 665 ntBASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 RN7SL589P-201ENST00000481268 310 ntBASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 AC069335.1-201ENST00000489972 472 ntBASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 HARS-203ENST00000431330 1774 ntTSL 2 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC22.88■■□□□ 1.25
CSB-PGBD3P0DP91 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 MIR943-201ENST00000401286 94 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 FAM58DP-201ENST00000428076 619 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 AC055876.3-201ENST00000431496 288 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 AC138649.4-201ENST00000612222 287 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 AF228730.6-201ENST00000641497 218 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 AC084121.3-201ENST00000641716 218 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 AC105233.6-201ENST00000642093 218 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 SLC25A24-204ENST00000569674 2357 ntBASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CSB-PGBD3P0DP91 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms