Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFAP04085 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.28■□□□□ 0.2
PDGFAP04085 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFAP04085 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 AC006557.2-201ENST00000592985 1240 ntBASIC16.28■□□□□ 0.2
PDGFAP04085 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 AD001527.2-201ENST00000622994 785 ntBASIC16.28■□□□□ 0.2
PDGFAP04085 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.28■□□□□ 0.2
PDGFAP04085 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PDGFAP04085 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFAP04085 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDGFAP04085 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFAP04085 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDGFAP04085 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PDGFAP04085 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PDGFAP04085 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 METTL21AP1-201ENST00000438852 635 ntBASIC16.27■□□□□ 0.2
PDGFAP04085 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFAP04085 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PDGFAP04085 AC136632.2-201ENST00000512891 861 ntBASIC16.27■□□□□ 0.2
PDGFAP04085 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.27■□□□□ 0.2
PDGFAP04085 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.27■□□□□ 0.2
PDGFAP04085 AC092865.6-201ENST00000642101 219 ntBASIC16.27■□□□□ 0.2
PDGFAP04085 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.27■□□□□ 0.2
PDGFAP04085 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDGFAP04085 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFAP04085 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFAP04085 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.27■□□□□ 0.19
PDGFAP04085 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFAP04085 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFAP04085 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFAP04085 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFAP04085 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.27■□□□□ 0.19
PDGFAP04085 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDGFAP04085 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
PDGFAP04085 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFAP04085 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFAP04085 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.26■□□□□ 0.19
PDGFAP04085 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 SPDYE21P-201ENST00000413323 827 ntBASIC16.26■□□□□ 0.19
PDGFAP04085 MCCD1P2-201ENST00000423228 335 ntBASIC16.26■□□□□ 0.19
PDGFAP04085 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.26■□□□□ 0.19
PDGFAP04085 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.26■□□□□ 0.19
PDGFAP04085 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PDGFAP04085 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms