Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.27■□□□□ 0.2
OPN1SWP03999 Z83836.1-201ENST00000624605 1642 ntBASIC16.27■□□□□ 0.2
OPN1SWP03999 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
OPN1SWP03999 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.27■□□□□ 0.2
OPN1SWP03999 PCDHB19P-201ENST00000570871 2371 ntBASIC16.27■□□□□ 0.2
OPN1SWP03999 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
OPN1SWP03999 SLC25A1P3-201ENST00000395415 828 ntBASIC16.27■□□□□ 0.2
OPN1SWP03999 AC096633.1-201ENST00000422446 749 ntBASIC16.27■□□□□ 0.2
OPN1SWP03999 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
OPN1SWP03999 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.27■□□□□ 0.2
OPN1SWP03999 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
OPN1SWP03999 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.27■□□□□ 0.2
OPN1SWP03999 AL390719.2-201ENST00000606993 987 ntBASIC16.27■□□□□ 0.2
OPN1SWP03999 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
OPN1SWP03999 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPN1SWP03999 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
OPN1SWP03999 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPN1SWP03999 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.27■□□□□ 0.19
OPN1SWP03999 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
OPN1SWP03999 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
OPN1SWP03999 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
OPN1SWP03999 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.26■□□□□ 0.19
OPN1SWP03999 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.26■□□□□ 0.19
OPN1SWP03999 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
OPN1SWP03999 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 AC093525.9-201ENST00000624961 1746 ntBASIC16.26■□□□□ 0.19
OPN1SWP03999 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 AC005521.1-201ENST00000393351 872 ntBASIC16.26■□□□□ 0.19
OPN1SWP03999 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
OPN1SWP03999 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.26■□□□□ 0.19
OPN1SWP03999 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
OPN1SWP03999 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.26■□□□□ 0.19
OPN1SWP03999 AC073508.3-201ENST00000619697 1419 ntBASIC16.26■□□□□ 0.19
OPN1SWP03999 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
OPN1SWP03999 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
OPN1SWP03999 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
OPN1SWP03999 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.25■□□□□ 0.19
OPN1SWP03999 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.25■□□□□ 0.19
OPN1SWP03999 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 LINC02012-201ENST00000608206 1725 ntBASIC16.25■□□□□ 0.19
OPN1SWP03999 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
OPN1SWP03999 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
OPN1SWP03999 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
OPN1SWP03999 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPN1SWP03999 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.25■□□□□ 0.19
OPN1SWP03999 AC002558.1-201ENST00000488906 803 ntBASIC16.25■□□□□ 0.19
OPN1SWP03999 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms