Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DRAP01903 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DRAP01903 OR6D1P-202ENST00000641007 5290 ntBASIC18.68■□□□□ 0.58
HLA-DRAP01903 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 AC097637.2-201ENST00000624096 1997 ntBASIC18.68■□□□□ 0.58
HLA-DRAP01903 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 AC093525.9-201ENST00000624961 1746 ntBASIC18.68■□□□□ 0.58
HLA-DRAP01903 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DRAP01903 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DRAP01903 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 SCARNA2-201ENST00000458748 420 ntBASIC18.67■□□□□ 0.58
HLA-DRAP01903 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 TP73-AS1-207ENST00000624167 988 ntBASIC18.67■□□□□ 0.58
HLA-DRAP01903 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DRAP01903 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DRAP01903 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 AC079781.3-201ENST00000449110 356 ntBASIC18.66■□□□□ 0.58
HLA-DRAP01903 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 AC021087.4-201ENST00000563761 564 ntBASIC18.66■□□□□ 0.58
HLA-DRAP01903 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 MTDHP4-201ENST00000600287 670 ntBASIC18.66■□□□□ 0.58
HLA-DRAP01903 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 AL121912.1-201ENST00000603683 238 ntBASIC18.66■□□□□ 0.58
HLA-DRAP01903 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms