Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.5■□□□□ 0.39
VAPBO95292 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPBO95292 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPBO95292 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VAPBO95292 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VAPBO95292 OR6D1P-203ENST00000641209 4860 ntBASIC17.5■□□□□ 0.39
VAPBO95292 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VAPBO95292 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 AC046185.3-201ENST00000623228 1824 ntBASIC17.49■□□□□ 0.39
VAPBO95292 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPBO95292 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPBO95292 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 DRAXINP1-201ENST00000437611 948 ntBASIC17.49■□□□□ 0.39
VAPBO95292 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPBO95292 TPSP2-201ENST00000561760 610 ntBASIC17.49■□□□□ 0.39
VAPBO95292 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.49■□□□□ 0.39
VAPBO95292 AP002414.4-201ENST00000589764 1148 ntBASIC17.49■□□□□ 0.39
VAPBO95292 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPBO95292 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPBO95292 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.49■□□□□ 0.39
VAPBO95292 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.49■□□□□ 0.39
VAPBO95292 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VAPBO95292 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.48■□□□□ 0.39
VAPBO95292 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VAPBO95292 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.48■□□□□ 0.39
VAPBO95292 TOB2P1-201ENST00000469761 992 ntBASIC17.48■□□□□ 0.39
VAPBO95292 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.48■□□□□ 0.39
VAPBO95292 Z69720.1-201ENST00000601483 472 ntBASIC17.48■□□□□ 0.39
VAPBO95292 AL358472.4-201ENST00000633140 710 ntBASIC17.48■□□□□ 0.39
VAPBO95292 AP000550.4-202ENST00000639755 178 ntBASIC17.48■□□□□ 0.39
VAPBO95292 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.48■□□□□ 0.39
VAPBO95292 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.48■□□□□ 0.39
VAPBO95292 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
VAPBO95292 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 TP73-AS1-210ENST00000637775 1455 ntBASIC17.48■□□□□ 0.39
VAPBO95292 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VAPBO95292 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.48■□□□□ 0.39
VAPBO95292 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VAPBO95292 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.48■□□□□ 0.39
VAPBO95292 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.47■□□□□ 0.39
VAPBO95292 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.47■□□□□ 0.39
VAPBO95292 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.47■□□□□ 0.39
VAPBO95292 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VAPBO95292 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 KRT18P35-201ENST00000510488 1269 ntBASIC17.47■□□□□ 0.39
VAPBO95292 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.47■□□□□ 0.39
VAPBO95292 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.47■□□□□ 0.39
VAPBO95292 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.47■□□□□ 0.39
VAPBO95292 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
VAPBO95292 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
VAPBO95292 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms