Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SNX4O95219 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX4O95219 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 AL096828.2-201ENST00000567259 1965 ntBASIC16.39■□□□□ 0.21
SNX4O95219 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX4O95219 POM121L3P-201ENST00000419331 1163 ntBASIC16.39■□□□□ 0.21
SNX4O95219 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SNX4O95219 DUSP5P1-201ENST00000441325 1139 ntBASIC16.39■□□□□ 0.21
SNX4O95219 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX4O95219 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX4O95219 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX4O95219 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX4O95219 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX4O95219 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX4O95219 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX4O95219 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.39■□□□□ 0.21
SNX4O95219 LINC01711-201ENST00000598340 967 ntBASIC16.39■□□□□ 0.21
SNX4O95219 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.39■□□□□ 0.21
SNX4O95219 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNX4O95219 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SNX4O95219 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SNX4O95219 NSUN5P1-202ENST00000421140 1535 ntBASIC16.39■□□□□ 0.21
SNX4O95219 NSUN5P2-203ENST00000457352 1529 ntBASIC16.39■□□□□ 0.21
SNX4O95219 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNX4O95219 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.39■□□□□ 0.21
SNX4O95219 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SNX4O95219 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.38■□□□□ 0.21
SNX4O95219 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 AP001094.4-201ENST00000579008 2176 ntBASIC16.38■□□□□ 0.21
SNX4O95219 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SNX4O95219 PP12613-201ENST00000424958 2230 ntBASIC16.38■□□□□ 0.21
SNX4O95219 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX4O95219 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX4O95219 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX4O95219 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SNX4O95219 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SNX4O95219 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SNX4O95219 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 AL450487.1-201ENST00000426799 995 ntBASIC16.38■□□□□ 0.21
SNX4O95219 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.38■□□□□ 0.21
SNX4O95219 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.38■□□□□ 0.21
SNX4O95219 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.38■□□□□ 0.21
SNX4O95219 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.38■□□□□ 0.21
SNX4O95219 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.38■□□□□ 0.21
SNX4O95219 AC099336.1-202ENST00000602961 463 ntBASIC16.38■□□□□ 0.21
SNX4O95219 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SNX4O95219 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.38■□□□□ 0.21
SNX4O95219 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SNX4O95219 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SNX4O95219 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNX4O95219 AL023806.1-201ENST00000603994 1649 ntBASIC16.37■□□□□ 0.21
SNX4O95219 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX4O95219 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SNX4O95219 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX4O95219 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX4O95219 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX4O95219 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX4O95219 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX4O95219 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SNX4O95219 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX4O95219 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNX4O95219 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.37■□□□□ 0.21
SNX4O95219 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
SNX4O95219 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms