Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC006538.1-201ENST00000567905 1585 ntBASIC16.72■□□□□ 0.27
GFRA3O60609 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.72■□□□□ 0.27
GFRA3O60609 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GFRA3O60609 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.71■□□□□ 0.27
GFRA3O60609 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GFRA3O60609 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 SPDYE19P-201ENST00000338590 713 ntBASIC16.71■□□□□ 0.27
GFRA3O60609 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.71■□□□□ 0.27
GFRA3O60609 HMGA1P7-201ENST00000406908 502 ntBASIC16.71■□□□□ 0.27
GFRA3O60609 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.71■□□□□ 0.27
GFRA3O60609 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.71■□□□□ 0.27
GFRA3O60609 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.71■□□□□ 0.27
GFRA3O60609 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GFRA3O60609 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.71■□□□□ 0.27
GFRA3O60609 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GFRA3O60609 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.71■□□□□ 0.27
GFRA3O60609 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GFRA3O60609 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.71■□□□□ 0.27
GFRA3O60609 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GFRA3O60609 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
GFRA3O60609 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
GFRA3O60609 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.7■□□□□ 0.26
GFRA3O60609 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 ANKRD19P-201ENST00000338192 862 ntBASIC16.7■□□□□ 0.26
GFRA3O60609 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
GFRA3O60609 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
GFRA3O60609 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
GFRA3O60609 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
GFRA3O60609 STK33P1-201ENST00000423835 1218 ntBASIC16.7■□□□□ 0.26
GFRA3O60609 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.7■□□□□ 0.26
GFRA3O60609 AL355994.2-201ENST00000447882 704 ntBASIC16.7■□□□□ 0.26
GFRA3O60609 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.7■□□□□ 0.26
GFRA3O60609 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.7■□□□□ 0.26
GFRA3O60609 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.7■□□□□ 0.26
GFRA3O60609 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.7■□□□□ 0.26
GFRA3O60609 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.7■□□□□ 0.26
GFRA3O60609 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.7■□□□□ 0.26
GFRA3O60609 AC008735.3-201ENST00000596646 500 ntBASIC16.7■□□□□ 0.26
GFRA3O60609 TEX28P1-201ENST00000613479 1221 ntBASIC16.7■□□□□ 0.26
GFRA3O60609 BNIP3P41-202ENST00000616656 861 ntBASIC16.7■□□□□ 0.26
GFRA3O60609 TEX28P2-201ENST00000617764 1221 ntBASIC16.7■□□□□ 0.26
GFRA3O60609 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.7■□□□□ 0.26
GFRA3O60609 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GFRA3O60609 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.69■□□□□ 0.26
GFRA3O60609 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
GFRA3O60609 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
GFRA3O60609 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.69■□□□□ 0.26
GFRA3O60609 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.69■□□□□ 0.26
GFRA3O60609 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.69■□□□□ 0.26
GFRA3O60609 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GFRA3O60609 AC007389.4-201ENST00000454674 793 ntBASIC16.69■□□□□ 0.26
GFRA3O60609 CROCCP4-201ENST00000457096 498 ntBASIC16.69■□□□□ 0.26
GFRA3O60609 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GFRA3O60609 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GFRA3O60609 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.69■□□□□ 0.26
GFRA3O60609 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.69■□□□□ 0.26
GFRA3O60609 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.69■□□□□ 0.26
GFRA3O60609 RARRES2P9-201ENST00000565168 469 ntBASIC16.69■□□□□ 0.26
GFRA3O60609 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.69■□□□□ 0.26
GFRA3O60609 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.69■□□□□ 0.26
GFRA3O60609 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GFRA3O60609 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms