Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SSSCA1O60232 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 AC092171.3-201ENST00000610122 2651 ntBASIC14.23□□□□□ -0.13
SSSCA1O60232 RNF216P1-203ENST00000404404 2427 ntBASIC14.23□□□□□ -0.13
SSSCA1O60232 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.23□□□□□ -0.13
SSSCA1O60232 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSSCA1O60232 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.23□□□□□ -0.13
SSSCA1O60232 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 AC026691.1-201ENST00000602502 2017 ntBASIC14.22□□□□□ -0.13
SSSCA1O60232 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SSSCA1O60232 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 AC068587.6-202ENST00000641839 5619 ntBASIC14.22□□□□□ -0.13
SSSCA1O60232 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 LINC02012-201ENST00000608206 1725 ntBASIC14.22□□□□□ -0.13
SSSCA1O60232 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 TSPY17P-201ENST00000450329 467 ntBASIC14.22□□□□□ -0.13
SSSCA1O60232 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.22□□□□□ -0.13
SSSCA1O60232 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.22□□□□□ -0.13
SSSCA1O60232 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.22□□□□□ -0.13
SSSCA1O60232 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.22□□□□□ -0.13
SSSCA1O60232 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.22□□□□□ -0.13
SSSCA1O60232 AC006449.5-201ENST00000610658 2098 ntBASIC14.22□□□□□ -0.13
SSSCA1O60232 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SSSCA1O60232 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.22□□□□□ -0.13
SSSCA1O60232 AL135905.2-201ENST00000584934 1404 ntBASIC14.22□□□□□ -0.13
SSSCA1O60232 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SSSCA1O60232 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.22□□□□□ -0.13
SSSCA1O60232 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.21□□□□□ -0.13
SSSCA1O60232 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SSSCA1O60232 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SSSCA1O60232 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.21□□□□□ -0.13
SSSCA1O60232 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.21□□□□□ -0.13
SSSCA1O60232 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSSCA1O60232 SLC25A1P2-201ENST00000430693 912 ntBASIC14.21□□□□□ -0.13
SSSCA1O60232 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.21□□□□□ -0.13
SSSCA1O60232 AC128676.1-201ENST00000454392 318 ntBASIC14.21□□□□□ -0.13
SSSCA1O60232 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SSSCA1O60232 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.21□□□□□ -0.13
SSSCA1O60232 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.21□□□□□ -0.13
SSSCA1O60232 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.21□□□□□ -0.13
SSSCA1O60232 AL353719.1-201ENST00000566847 864 ntBASIC14.21□□□□□ -0.13
SSSCA1O60232 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SSSCA1O60232 AL023803.3-201ENST00000615559 522 ntBASIC14.21□□□□□ -0.13
SSSCA1O60232 FAM197Y4-202ENST00000622692 608 ntBASIC14.21□□□□□ -0.13
SSSCA1O60232 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SSSCA1O60232 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.21□□□□□ -0.13
SSSCA1O60232 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.21□□□□□ -0.13
SSSCA1O60232 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SSSCA1O60232 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms