Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SGCEO43556 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.42■□□□□ 0.06
SGCEO43556 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SGCEO43556 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.42■□□□□ 0.06
SGCEO43556 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.42■□□□□ 0.06
SGCEO43556 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 AC069148.1-201ENST00000608741 768 ntBASIC15.42■□□□□ 0.06
SGCEO43556 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SGCEO43556 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SGCEO43556 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SGCEO43556 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.41■□□□□ 0.06
SGCEO43556 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SGCEO43556 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SGCEO43556 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.41■□□□□ 0.06
SGCEO43556 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SGCEO43556 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.41■□□□□ 0.06
SGCEO43556 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 DRAXINP1-201ENST00000437611 948 ntBASIC15.41■□□□□ 0.06
SGCEO43556 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.41■□□□□ 0.06
SGCEO43556 AC002558.1-201ENST00000488906 803 ntBASIC15.41■□□□□ 0.06
SGCEO43556 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.41■□□□□ 0.06
SGCEO43556 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SGCEO43556 AP002414.4-201ENST00000589764 1148 ntBASIC15.41■□□□□ 0.06
SGCEO43556 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SGCEO43556 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SGCEO43556 Z69720.1-201ENST00000601483 472 ntBASIC15.41■□□□□ 0.06
SGCEO43556 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.41■□□□□ 0.06
SGCEO43556 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 PP12613-201ENST00000424958 2230 ntBASIC15.41■□□□□ 0.06
SGCEO43556 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.41■□□□□ 0.06
SGCEO43556 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.41■□□□□ 0.06
SGCEO43556 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.41■□□□□ 0.06
SGCEO43556 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SGCEO43556 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.41■□□□□ 0.06
SGCEO43556 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.4■□□□□ 0.06
SGCEO43556 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SGCEO43556 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.4■□□□□ 0.06
SGCEO43556 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.4■□□□□ 0.06
SGCEO43556 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SGCEO43556 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SGCEO43556 AC233702.3-201ENST00000578656 1387 ntBASIC15.4■□□□□ 0.06
SGCEO43556 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms