Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 AL023806.1-201ENST00000603994 1649 ntBASIC16.63■□□□□ 0.25
PCDH17O14917 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PCDH17O14917 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PCDH17O14917 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH17O14917 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH17O14917 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 AF186996.4-201ENST00000467186 377 ntBASIC16.63■□□□□ 0.25
PCDH17O14917 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH17O14917 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDH17O14917 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH17O14917 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDH17O14917 AD000864.1-201ENST00000624076 2295 ntBASIC16.63■□□□□ 0.25
PCDH17O14917 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PCDH17O14917 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDH17O14917 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.63■□□□□ 0.25
PCDH17O14917 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDH17O14917 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 AP001094.4-201ENST00000579008 2176 ntBASIC16.62■□□□□ 0.25
PCDH17O14917 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PCDH17O14917 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 RPS2P28-201ENST00000314255 741 ntBASIC16.62■□□□□ 0.25
PCDH17O14917 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDH17O14917 AC007967.3-201ENST00000434308 558 ntBASIC16.62■□□□□ 0.25
PCDH17O14917 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDH17O14917 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDH17O14917 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.62■□□□□ 0.25
PCDH17O14917 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.62■□□□□ 0.25
PCDH17O14917 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.62■□□□□ 0.25
PCDH17O14917 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 AL139288.1-201ENST00000623748 933 ntBASIC16.62■□□□□ 0.25
PCDH17O14917 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PCDH17O14917 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PCDH17O14917 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PCDH17O14917 AP005117.1-201ENST00000584346 1413 ntBASIC16.62■□□□□ 0.25
PCDH17O14917 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.62■□□□□ 0.25
PCDH17O14917 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.61■□□□□ 0.25
PCDH17O14917 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PCDH17O14917 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms