Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC27.71■■■□□ 2.03
CHD1O14646 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC27.71■■■□□ 2.03
CHD1O14646 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC27.71■■■□□ 2.03
CHD1O14646 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
CHD1O14646 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC27.71■■■□□ 2.03
CHD1O14646 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHD1O14646 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHD1O14646 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHD1O14646 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHD1O14646 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC27.7■■■□□ 2.03
CHD1O14646 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC27.7■■■□□ 2.03
CHD1O14646 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
CHD1O14646 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC27.7■■■□□ 2.03
CHD1O14646 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHD1O14646 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CHD1O14646 RPL37AP1-201ENST00000412502 279 ntBASIC27.7■■■□□ 2.03
CHD1O14646 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHD1O14646 MIR6775-201ENST00000617557 69 ntBASIC27.7■■■□□ 2.03
CHD1O14646 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC27.7■■■□□ 2.03
CHD1O14646 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
CHD1O14646 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC27.7■■■□□ 2.02
CHD1O14646 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC27.7■■■□□ 2.02
CHD1O14646 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CHD1O14646 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CHD1O14646 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
CHD1O14646 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC27.7■■■□□ 2.02
CHD1O14646 SLC22A20-204ENST00000530038 1673 ntBASIC27.69■■■□□ 2.02
CHD1O14646 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHD1O14646 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHD1O14646 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC27.69■■■□□ 2.02
CHD1O14646 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHD1O14646 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC27.69■■■□□ 2.02
CHD1O14646 RPL28-204ENST00000431533 590 ntTSL 2 BASIC27.69■■■□□ 2.02
CHD1O14646 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC27.69■■■□□ 2.02
CHD1O14646 AC011495.1-201ENST00000498085 584 ntBASIC27.69■■■□□ 2.02
CHD1O14646 AC093004.1-201ENST00000508850 424 ntBASIC27.69■■■□□ 2.02
CHD1O14646 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC27.69■■■□□ 2.02
CHD1O14646 FUZ-207ENST00000526575 482 ntTSL 4 BASIC27.69■■■□□ 2.02
CHD1O14646 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC27.69■■■□□ 2.02
CHD1O14646 RPL28-206ENST00000558752 671 ntTSL 3 BASIC27.69■■■□□ 2.02
CHD1O14646 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC27.69■■■□□ 2.02
CHD1O14646 GPR182-203ENST00000622922 591 ntBASIC27.69■■■□□ 2.02
CHD1O14646 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC27.68■■■□□ 2.02
CHD1O14646 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHD1O14646 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC27.68■■■□□ 2.02
CHD1O14646 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHD1O14646 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CHD1O14646 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHD1O14646 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
CHD1O14646 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC27.68■■■□□ 2.02
CHD1O14646 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CHD1O14646 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC27.68■■■□□ 2.02
CHD1O14646 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC27.68■■■□□ 2.02
CHD1O14646 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC27.68■■■□□ 2.02
CHD1O14646 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC27.68■■■□□ 2.02
CHD1O14646 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC27.68■■■□□ 2.02
CHD1O14646 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CHD1O14646 AL353732.1-201ENST00000569618 1459 ntBASIC27.68■■■□□ 2.02
CHD1O14646 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHD1O14646 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC27.68■■■□□ 2.02
CHD1O14646 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD1O14646 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
CHD1O14646 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD1O14646 HAUS4P1-201ENST00000406739 1145 ntBASIC27.67■■■□□ 2.02
CHD1O14646 MFF-223ENST00000524634 647 ntTSL 2 BASIC27.67■■■□□ 2.02
CHD1O14646 AC055876.2-201ENST00000531834 546 ntBASIC27.67■■■□□ 2.02
CHD1O14646 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHD1O14646 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC27.67■■■□□ 2.02
CHD1O14646 AC073389.1-201ENST00000595595 795 ntBASIC27.67■■■□□ 2.02
CHD1O14646 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD1O14646 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD1O14646 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC27.67■■■□□ 2.02
CHD1O14646 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD1O14646 SPDYE19P-201ENST00000338590 713 ntBASIC27.67■■■□□ 2.02
CHD1O14646 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC27.67■■■□□ 2.02
CHD1O14646 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHD1O14646 TMEM261P1-201ENST00000604899 340 ntBASIC27.67■■■□□ 2.02
CHD1O14646 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC27.66■■■□□ 2.02
CHD1O14646 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
CHD1O14646 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 AL023806.1-201ENST00000603994 1649 ntBASIC27.66■■■□□ 2.02
CHD1O14646 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
CHD1O14646 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC27.66■■■□□ 2.02
CHD1O14646 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC27.66■■■□□ 2.02
CHD1O14646 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 AC133552.6-201ENST00000613406 534 ntBASIC27.66■■■□□ 2.02
CHD1O14646 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHD1O14646 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms