Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN4O14493 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN4O14493 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN4O14493 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CLDN4O14493 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN4O14493 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN4O14493 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN4O14493 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN4O14493 FAM197Y8-203ENST00000450145 560 ntBASIC16.39■□□□□ 0.21
CLDN4O14493 AF186996.4-201ENST00000467186 377 ntBASIC16.39■□□□□ 0.21
CLDN4O14493 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN4O14493 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN4O14493 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN4O14493 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN4O14493 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN4O14493 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN4O14493 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN4O14493 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN4O14493 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN4O14493 BX005266.1-201ENST00000473402 457 ntBASIC16.38■□□□□ 0.21
CLDN4O14493 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN4O14493 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 AL160237.2-201ENST00000556165 472 ntBASIC16.38■□□□□ 0.21
CLDN4O14493 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN4O14493 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN4O14493 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN4O14493 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CLDN4O14493 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN4O14493 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN4O14493 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN4O14493 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN4O14493 LINC00896-202ENST00000609602 2128 ntBASIC16.37■□□□□ 0.21
CLDN4O14493 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 AC016396.2-201ENST00000562575 1417 ntBASIC16.37■□□□□ 0.21
CLDN4O14493 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN4O14493 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 RPS2P28-201ENST00000314255 741 ntBASIC16.37■□□□□ 0.21
CLDN4O14493 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN4O14493 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLDN4O14493 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN4O14493 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN4O14493 SART3-203ENST00000546611 1184 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms