Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 ELK2BP-201ENST00000415014 1224 ntBASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 AC092910.1-201ENST00000482027 1129 ntBASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 AC016396.2-201ENST00000562575 1417 ntBASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YJEFN3A6XGL0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 SLC25A1P3-201ENST00000395415 828 ntBASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YJEFN3A6XGL0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 AL356488.2-201ENST00000602755 427 ntBASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YJEFN3A6XGL0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 HCG11-201ENST00000411553 5696 ntBASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 IL9RP2-201ENST00000423948 1312 ntBASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 AL590787.1-201ENST00000568856 1315 ntBASIC18.08■□□□□ 0.49
YJEFN3A6XGL0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 AL590627.1-203ENST00000421194 1026 ntBASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 AC117500.6-201ENST00000624871 588 ntBASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.08■□□□□ 0.48
YJEFN3A6XGL0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms