Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.27□□□□□ -0.44
LINC01546A6NGU7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 PVRIG2P-201ENST00000435460 978 ntBASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AC069152.1-201ENST00000438030 544 ntBASIC12.27□□□□□ -0.45
LINC01546A6NGU7 SEC1P-202ENST00000473944 940 ntBASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AP003041.3-201ENST00000527151 707 ntBASIC12.27□□□□□ -0.45
LINC01546A6NGU7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AL023803.3-201ENST00000615559 522 ntBASIC12.27□□□□□ -0.45
LINC01546A6NGU7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 AL136379.1-201ENST00000623471 2642 ntBASIC12.27□□□□□ -0.45
LINC01546A6NGU7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 KRT89P-201ENST00000620027 1478 ntBASIC12.27□□□□□ -0.45
LINC01546A6NGU7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01546A6NGU7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AC112698.1-201ENST00000510299 916 ntBASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.26□□□□□ -0.45
LINC01546A6NGU7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 TUBB8P12-201ENST00000308911 1335 ntBASIC12.26□□□□□ -0.45
LINC01546A6NGU7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 TUBB7P-202ENST00000428444 1305 ntBASIC12.26□□□□□ -0.45
LINC01546A6NGU7 TUBB8P7-204ENST00000567960 1332 ntBASIC12.26□□□□□ -0.45
LINC01546A6NGU7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.26□□□□□ -0.45
LINC01546A6NGU7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms