Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RCCD1A6NED2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RCCD1A6NED2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RCCD1A6NED2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RCCD1A6NED2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.48■□□□□ 0.55
RCCD1A6NED2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 TERF1P1-201ENST00000311003 1181 ntBASIC18.48■□□□□ 0.55
RCCD1A6NED2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.48■□□□□ 0.55
RCCD1A6NED2 ATP5G1P1-201ENST00000448724 379 ntBASIC18.48■□□□□ 0.55
RCCD1A6NED2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 AL359075.1-203ENST00000462729 1002 ntBASIC18.48■□□□□ 0.55
RCCD1A6NED2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.48■□□□□ 0.55
RCCD1A6NED2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.48■□□□□ 0.55
RCCD1A6NED2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 AL391005.1-201ENST00000623953 2435 ntBASIC18.48■□□□□ 0.55
RCCD1A6NED2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RCCD1A6NED2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.48■□□□□ 0.55
RCCD1A6NED2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 AL162727.3-201ENST00000635661 2787 ntBASIC18.47■□□□□ 0.55
RCCD1A6NED2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 EGFEM1P-202ENST00000431685 1563 ntBASIC18.47■□□□□ 0.55
RCCD1A6NED2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.47■□□□□ 0.55
RCCD1A6NED2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 PCDHB17P-201ENST00000539533 2393 ntBASIC18.47■□□□□ 0.55
RCCD1A6NED2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RCCD1A6NED2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.47■□□□□ 0.55
RCCD1A6NED2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 MYCLP1-201ENST00000372451 1075 ntBASIC18.46■□□□□ 0.55
RCCD1A6NED2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 AL845331.1-201ENST00000424978 1190 ntBASIC18.46■□□□□ 0.55
RCCD1A6NED2 BX664615.1-201ENST00000443558 458 ntBASIC18.46■□□□□ 0.55
RCCD1A6NED2 AC112907.2-201ENST00000448639 330 ntBASIC18.46■□□□□ 0.55
RCCD1A6NED2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 AC012306.2-201ENST00000609350 630 ntBASIC18.46■□□□□ 0.55
RCCD1A6NED2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 AC125634.1-201ENST00000438758 1403 ntBASIC18.46■□□□□ 0.55
RCCD1A6NED2 KRT8P10-201ENST00000450021 1447 ntBASIC18.46■□□□□ 0.55
RCCD1A6NED2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RCCD1A6NED2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RCCD1A6NED2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms