Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 TSPY15P-201ENST00000457163 923 ntBASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 AL512604.3-201ENST00000569583 964 ntBASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 AL139327.4-201ENST00000612362 153 ntBASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 LINC02012-201ENST00000608206 1725 ntBASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV5A0A0B4J249 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 MIR718-201ENST00000390190 70 ntBASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 HMGA1P5-201ENST00000412453 271 ntBASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 TSPY12P-201ENST00000421279 868 ntBASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 SNORA78-201ENST00000459373 127 ntBASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 GCSHP2-201ENST00000560971 527 ntBASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 NAPSB-206ENST00000562112 1266 ntBASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 AC009154.2-201ENST00000621177 724 ntBASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV5A0A0B4J249 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms