Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.95■□□□□ 0.94
DDX49Q9Y6V7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX49Q9Y6V7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
DDX49Q9Y6V7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 AL138688.1-201ENST00000624851 1594 ntBASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 SDHAP2-201ENST00000455183 2001 ntBASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 IGHGP-201ENST00000390555 1178 ntBASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 AC111152.3-201ENST00000569699 673 ntBASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 IGHV3-41-201ENST00000613121 348 ntBASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 AL031008.1-201ENST00000619963 541 ntBASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX49Q9Y6V7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 NUS1P1-201ENST00000446295 882 ntBASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 GPR32P1-201ENST00000601788 811 ntBASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
DDX49Q9Y6V7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 AC074051.2-201ENST00000565115 352 ntBASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 AC233702.3-201ENST00000578656 1387 ntBASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms