Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 KRT8P23-201ENST00000560090 1207 ntBASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTCH2Q9Y6C5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 AC009949.1-201ENST00000623048 1830 ntBASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PTCH2Q9Y6C5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 AC002558.1-201ENST00000488906 803 ntBASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 AC004233.3-201ENST00000607794 1269 ntBASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 AL161645.1-201ENST00000622716 1255 ntBASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 AC084121.4-201ENST00000641598 221 ntBASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 AF228730.8-201ENST00000642140 221 ntBASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 CU639417.3-201ENST00000624240 1404 ntBASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.47■□□□□ 0.71
PTCH2Q9Y6C5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 GPR53P-205ENST00000457298 1084 ntBASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 AC116407.2-201ENST00000613639 860 ntBASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 AC126763.1-201ENST00000552015 2118 ntBASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCH2Q9Y6C5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 AC120498.9-201ENST00000339021 3867 ntBASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 AC098818.2-201ENST00000564925 2320 ntBASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 MYCLP1-201ENST00000372451 1075 ntBASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 AC107918.2-201ENST00000530817 355 ntBASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH2Q9Y6C5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms