Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 BID-214ENST00000617586 542 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAPPC1Q9Y5R8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAPPC1Q9Y5R8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 HLA-A-209ENST00000638375 975 ntBASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 KRT8P50-201ENST00000562022 1438 ntBASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 AC046185.3-201ENST00000623228 1824 ntBASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAPPC1Q9Y5R8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 AL109659.2-201ENST00000606809 1674 ntBASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 AL356441.2-201ENST00000443009 864 ntBASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 AC006557.6-201ENST00000623071 864 ntBASIC13.19□□□□□ -0.3
TRAPPC1Q9Y5R8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms