Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 AC012317.2-201ENST00000623305 2251 ntBASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 MTDHP4-201ENST00000600287 670 ntBASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 AC104109.2-201ENST00000602919 1418 ntBASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
NPIPA1Q9UND3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 AC025062.2-201ENST00000605477 670 ntBASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 AC097374.2-201ENST00000618617 1306 ntBASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPA1Q9UND3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AC012640.2-201ENST00000561606 901 ntBASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AC116407.2-201ENST00000613639 860 ntBASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AC139530.3-201ENST00000620344 690 ntBASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 AP000867.4-201ENST00000641616 219 ntBASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms