Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 LINC00982-205ENST00000420957 435 ntBASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 AC104692.2-201ENST00000603054 253 ntBASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 AL589182.2-201ENST00000619332 1049 ntBASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHA4Q9UN74 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 AC090340.1-201ENST00000620778 4980 ntBASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 TPM4P1-201ENST00000436100 807 ntBASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 FAM197Y8-203ENST00000450145 560 ntBASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 RNPS1P1-201ENST00000507437 918 ntBASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 NCF1C-201ENST00000438382 1427 ntBASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHA4Q9UN74 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHA4Q9UN74 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms