Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NCKIPSDQ9NZQ3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NCKIPSDQ9NZQ3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
NCKIPSDQ9NZQ3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NCKIPSDQ9NZQ3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.64■□□□□ 0.42
NCKIPSDQ9NZQ3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NCKIPSDQ9NZQ3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 RBM17P3-201ENST00000417687 1192 ntBASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 AL590627.1-203ENST00000421194 1026 ntBASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 KRT18P67-201ENST00000432816 1264 ntBASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 FAM197Y8-203ENST00000450145 560 ntBASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 AC120114.3-201ENST00000611923 658 ntBASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 AL139384.1-201ENST00000612143 3047 ntBASIC17.64■□□□□ 0.41
NCKIPSDQ9NZQ3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 PMS2P1-201ENST00000431037 1228 ntBASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 AC080080.1-201ENST00000625121 2420 ntBASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NCKIPSDQ9NZQ3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 SCARNA2-201ENST00000458748 420 ntBASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 GPALPP1-207ENST00000611650 899 ntBASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 AC023511.2-201ENST00000618803 211 ntBASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NCKIPSDQ9NZQ3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms