Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 AC026396.1-201ENST00000419388 421 ntBASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 KRT18P27-201ENST00000427733 1299 ntBASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 AC008735.5-201ENST00000623544 497 ntBASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 AP001005.1-201ENST00000571755 1248 ntBASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 MIR7706-201ENST00000613747 67 ntBASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.74■□□□□ 0.43
TMEM248Q9NWD8 HLA-A-201ENST00000376802 1334 ntBASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 AC073621.1-201ENST00000392730 636 ntBASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 AC012640.2-201ENST00000561606 901 ntBASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 AL645608.8-201ENST00000606034 2086 ntBASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 LETM1P2-201ENST00000597330 2178 ntBASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM248Q9NWD8 AL590787.1-201ENST00000568856 1315 ntBASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM248Q9NWD8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms