Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 CRYGEP-201ENST00000412192 528 ntBASIC18.01■□□□□ 0.47
HPS4Q9NQG7 VN2R19P-201ENST00000442399 1052 ntBASIC18.01■□□□□ 0.47
HPS4Q9NQG7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 HCG4B-203ENST00000450128 991 ntBASIC18.01■□□□□ 0.47
HPS4Q9NQG7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 MIR4751-201ENST00000578027 74 ntBASIC18.01■□□□□ 0.47
HPS4Q9NQG7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 AC008667.4-201ENST00000607370 168 ntBASIC18.01■□□□□ 0.47
HPS4Q9NQG7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HPS4Q9NQG7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HPS4Q9NQG7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18■□□□□ 0.47
HPS4Q9NQG7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18■□□□□ 0.47
HPS4Q9NQG7 AP000997.3-201ENST00000623333 2250 ntBASIC18■□□□□ 0.47
HPS4Q9NQG7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18■□□□□ 0.47
HPS4Q9NQG7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HPS4Q9NQG7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18■□□□□ 0.47
HPS4Q9NQG7 PMS2P2-201ENST00000425039 1128 ntBASIC18■□□□□ 0.47
HPS4Q9NQG7 DNAJB3-202ENST00000449667 1266 ntBASIC18■□□□□ 0.47
HPS4Q9NQG7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18■□□□□ 0.47
HPS4Q9NQG7 AC018845.2-201ENST00000568326 409 ntBASIC18■□□□□ 0.47
HPS4Q9NQG7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18■□□□□ 0.47
HPS4Q9NQG7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HPS4Q9NQG7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18■□□□□ 0.47
HPS4Q9NQG7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18■□□□□ 0.47
HPS4Q9NQG7 NOC2LP2-201ENST00000407594 1944 ntBASIC18■□□□□ 0.47
HPS4Q9NQG7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HPS4Q9NQG7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 BX276092.7-203ENST00000637198 1536 ntBASIC17.99■□□□□ 0.47
HPS4Q9NQG7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 DDX43P3-201ENST00000441064 443 ntBASIC17.99■□□□□ 0.47
HPS4Q9NQG7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 STK19B-204ENST00000512515 211 ntBASIC17.99■□□□□ 0.47
HPS4Q9NQG7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AC116407.2-201ENST00000613639 860 ntBASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AC004790.2-201ENST00000623588 572 ntBASIC17.99■□□□□ 0.47
HPS4Q9NQG7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AC079781.4-201ENST00000641908 219 ntBASIC17.99■□□□□ 0.47
HPS4Q9NQG7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms