Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH9Q9HC56 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 LINC02012-201ENST00000608206 1725 ntBASIC17.98■□□□□ 0.47
PCDH9Q9HC56 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 AP005901.3-202ENST00000581653 237 ntBASIC17.98■□□□□ 0.47
PCDH9Q9HC56 AC005336.2-201ENST00000593183 939 ntBASIC17.98■□□□□ 0.47
PCDH9Q9HC56 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 Z69720.1-201ENST00000601483 472 ntBASIC17.98■□□□□ 0.47
PCDH9Q9HC56 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 AC046185.3-201ENST00000623228 1824 ntBASIC17.98■□□□□ 0.47
PCDH9Q9HC56 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH9Q9HC56 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 MYCLP1-201ENST00000372451 1075 ntBASIC17.97■□□□□ 0.47
PCDH9Q9HC56 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH9Q9HC56 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 AP000867.3-201ENST00000524675 377 ntBASIC17.96■□□□□ 0.47
PCDH9Q9HC56 AC019129.2-201ENST00000609837 1235 ntBASIC17.96■□□□□ 0.47
PCDH9Q9HC56 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDH9Q9HC56 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms