Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.25■□□□□ 0.03
CDH20Q9HBT6 IFNL4P1-201ENST00000607083 540 ntBASIC15.25■□□□□ 0.03
CDH20Q9HBT6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 AL355312.1-201ENST00000407115 2176 ntBASIC15.25■□□□□ 0.03
CDH20Q9HBT6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CDH20Q9HBT6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 REXO1L11P-201ENST00000620964 1927 ntBASIC15.24■□□□□ 0.03
CDH20Q9HBT6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 AC005104.2-201ENST00000427818 678 ntBASIC15.24■□□□□ 0.03
CDH20Q9HBT6 DUSP5P1-201ENST00000441325 1139 ntBASIC15.24■□□□□ 0.03
CDH20Q9HBT6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 AC133963.1-201ENST00000504166 1679 ntBASIC15.24■□□□□ 0.03
CDH20Q9HBT6 LINC00304-203ENST00000565008 1864 ntBASIC15.24■□□□□ 0.03
CDH20Q9HBT6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 AC099398.1-201ENST00000567919 2776 ntBASIC15.24■□□□□ 0.03
CDH20Q9HBT6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDH20Q9HBT6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 AC132008.2-207ENST00000454517 770 ntBASIC15.23■□□□□ 0.03
CDH20Q9HBT6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.23■□□□□ 0.03
CDH20Q9HBT6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 AL691432.3-201ENST00000621860 400 ntBASIC15.23■□□□□ 0.03
CDH20Q9HBT6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH20Q9HBT6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms