Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 AC012615.1-201ENST00000565797 1299 ntBASIC16.65■□□□□ 0.26
BRF2Q9HAW0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 AC092329.2-201ENST00000598402 547 ntBASIC16.65■□□□□ 0.26
BRF2Q9HAW0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 AC114341.1-201ENST00000618070 349 ntBASIC16.65■□□□□ 0.26
BRF2Q9HAW0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 AL358472.4-201ENST00000633140 710 ntBASIC16.65■□□□□ 0.26
BRF2Q9HAW0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRF2Q9HAW0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
BRF2Q9HAW0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
BRF2Q9HAW0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 PCDHA12-202ENST00000613593 2588 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 ATP5G2P1-201ENST00000433580 426 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AC104819.1-201ENST00000504587 486 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 KRT18P35-201ENST00000510488 1269 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AC124947.2-201ENST00000547118 1133 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AC074051.2-201ENST00000565115 352 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AC073592.5-201ENST00000624854 528 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AL135999.2-201ENST00000622438 1686 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 AC106820.2-201ENST00000563775 3264 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRF2Q9HAW0 PMPCAP1-201ENST00000508114 1576 ntBASIC16.64■□□□□ 0.25
BRF2Q9HAW0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BRF2Q9HAW0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms