Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 AC004817.3-201ENST00000602957 2129 ntBASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 AL773604.1-201ENST00000617417 272 ntBASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 PKD1P1-201ENST00000458669 6805 ntBASIC17.61■□□□□ 0.41
ATP13A3Q9H7F0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 LYSMD4-203ENST00000378904 2122 ntBASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 RPS2P28-201ENST00000314255 741 ntBASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 AC018712.1-201ENST00000455767 687 ntBASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 AC025062.2-201ENST00000605477 670 ntBASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP13A3Q9H7F0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 AC067852.2-201ENST00000590513 2313 ntBASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 MRPL3P1-201ENST00000400109 1033 ntBASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 SLC25A6P4-201ENST00000586535 553 ntBASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP13A3Q9H7F0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms