Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 AL031008.1-201ENST00000619963 541 ntBASIC16.16■□□□□ 0.18
UBQLN3Q9H347 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBQLN3Q9H347 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.15■□□□□ 0.18
UBQLN3Q9H347 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC079781.3-201ENST00000449110 356 ntBASIC16.15■□□□□ 0.18
UBQLN3Q9H347 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC132008.2-207ENST00000454517 770 ntBASIC16.15■□□□□ 0.18
UBQLN3Q9H347 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AL121912.1-201ENST00000603683 238 ntBASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC116407.2-201ENST00000613639 860 ntBASIC16.15■□□□□ 0.18
UBQLN3Q9H347 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 AC009949.1-201ENST00000623048 1830 ntBASIC16.15■□□□□ 0.18
UBQLN3Q9H347 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
UBQLN3Q9H347 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.14■□□□□ 0.18
UBQLN3Q9H347 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
UBQLN3Q9H347 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.14■□□□□ 0.18
UBQLN3Q9H347 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
UBQLN3Q9H347 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 AC010460.3-201ENST00000511359 1579 ntBASIC16.14■□□□□ 0.17
UBQLN3Q9H347 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 FAM220CP-201ENST00000395253 831 ntBASIC16.14■□□□□ 0.17
UBQLN3Q9H347 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 AF238378.1-201ENST00000526806 358 ntBASIC16.14■□□□□ 0.17
UBQLN3Q9H347 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms