Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SMIM3Q9BZL3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM3Q9BZL3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM3Q9BZL3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 MIR3180-5-201ENST00000583743 153 ntBASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 DBET-201ENST00000630918 3363 ntBASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SMIM3Q9BZL3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 AP002414.2-201ENST00000591780 3365 ntBASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 AC016396.2-201ENST00000562575 1417 ntBASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SMIM3Q9BZL3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 NIFKP9-201ENST00000419265 221 ntBASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 CROCCP5-201ENST00000436658 830 ntBASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 KRT16P5-201ENST00000455284 522 ntBASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMIM3Q9BZL3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 AL161772.1-201ENST00000610494 4412 ntBASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 MST1L-201ENST00000442552 2185 ntBASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 AL513523.2-202ENST00000427283 2040 ntBASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 KRASP1-201ENST00000407852 552 ntBASIC14.26□□□□□ -0.13
SMIM3Q9BZL3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms